| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4210 |
|---|
| Symbol | |
|---|
| ID | 6982983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 4387611 |
|---|
| End bp | 4389257 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643398941 |
|---|
| Product | lipopolysaccharide biosynthesis protein |
|---|
| Protein accession | YP_002283698 |
|---|
| Protein GI | 209551781 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGT ATGACAGGAA CAGGGTAAGC CGGCTCCCTG GCTGGCGCAG TTATGAGTCG
TCTCAGACTG CGCCGGAAGG CGTGCGCATG CGCAGTCCCG TGGTCCGTCC GGACGATTTC
GTCCCTCCGC CGCCCGAACC CGCCCCTCCT GCCTTTGTGC CGCCGCCGGC AAGTGTTGCG
CAACCCCGCC AAGCCGAACG CCCGGCGCCC CCGTCCTCGG CTGTGCCCCC GACGGCGCCC
ACGACGGCAC CTAGGAAACA GCCGGTCGTG GACGCGCCGC CGAACGCAGT GCCCGCCTCT
GCCGCACCGC TTCTCGACCT CCGCTCAAGC GTCGCCGCGA TCTGGAGCCG GCGGTTGGTC
GTGCTTGTTC TTGCCCTTCT CGGCGCCGTC GCCGGCGGGG TGGTGGCGCC CACCATCGGG
CAAAAATTCA CCGCCGTCAG CAGCCTCTAT TTCGATCCGC GCCAGATCGG TCTTGCCGAT
GCGGGCGGTC AGTCTTCGGG GCCTTCGCCG GAAATGATCT CGACTTTGAT CGACAGCCAG
GTGCAGATCC TGACCTCCGG CAATGTACTG CGCCGCGTCG TCGAGACCAT GAAGCTCGAC
CAGGATCCGG AATTCACCGG CGGCCGCACC GATGGCGCCG CCGTGATCGG CACTCTGCAG
AAGGCGCTGG TCATTACCCG GCAGGCCAGC ACCTATGTCG TTTCGCTTGC CGCGACGACC
AATGATCCCG AGAAATCGGC AAGACTGGCC AACCAGGTCG TCACCTCCTT CACCGAGGAG
GAAAACAGCG CCTCGAACGG CATCTACGAA AACACCTCCT CGACGCTGGA CGGACGCCTC
GACGATTTGC GGCAGAAGGT GCTGGAGGCT GAGCAGGCTG TCGAAACCTT CCGCGCCGAC
AACGACATGG CCGCGACCGA GGGCAATCTG ATTTCCGATC AGCGGCTCGT CTCGCTGAAC
ACGATGCTGG TGACGGCGCA GGAAAAAACC ATCCAGGCCA AGGCCCGCGC CGATGCCGTC
GCCAATCTCC GCGTCGAGGA TATCGTTGCC GGCAACCAGG CGGAGGGCGG CGTCACTTCG
CCGCTGGTCA GCCTGCGCCA GCAATATGCC ACCCAGGCCG CCGCCGTCGG CAGCCTCGAA
AGCCAGATGG GTACGCGCCA TCCGCGCCTG CAGGCGGCCC GCTCCTCGCT GCAGAGCATA
TCAGGCGAAA TCAAGGGCGA ACTGCAGCGT CTCGCTACCT CGGCAAGAGG CGAATACGAG
CAGGCCAAGG CCGCCGAGGA CAGCATCGCC AAGGAGCTTG CCGTGCAGAA GGCGCTGCAG
GCGAGCACCT CGGACAAGCA GGTGGAACTG AACGAATTGC AGCGCAAGGC GACGGCGGCG
CGCGATATTT ACGAGACGGT GCTGAAGCGC TCCAGCCAGA CGAGCGAGGA GCAGAACCTC
AACCAGAGCA ACATTCGCGT CATCTCGCCG GCCGAGCCGC CTGTGAAGGC CGACGGCCCG
GGAAAGAAGA TCCTGCTCAT CGCCGGTATC ATCGGCGGTC TTCTCGCCGG TTTCGTCGTC
GGCGCTGGTT TTGCGATCCT CGCCGCCCTC TTCAGCCACC CTGTCGTCAG AAGTTATTTC
AGCAGGTCGC CCGCGACCAC CGCTTGA
|
|---|
| Protein sequence | MNQYDRNRVS RLPGWRSYES SQTAPEGVRM RSPVVRPDDF VPPPPEPAPP AFVPPPASVA
QPRQAERPAP PSSAVPPTAP TTAPRKQPVV DAPPNAVPAS AAPLLDLRSS VAAIWSRRLV
VLVLALLGAV AGGVVAPTIG QKFTAVSSLY FDPRQIGLAD AGGQSSGPSP EMISTLIDSQ
VQILTSGNVL RRVVETMKLD QDPEFTGGRT DGAAVIGTLQ KALVITRQAS TYVVSLAATT
NDPEKSARLA NQVVTSFTEE ENSASNGIYE NTSSTLDGRL DDLRQKVLEA EQAVETFRAD
NDMAATEGNL ISDQRLVSLN TMLVTAQEKT IQAKARADAV ANLRVEDIVA GNQAEGGVTS
PLVSLRQQYA TQAAAVGSLE SQMGTRHPRL QAARSSLQSI SGEIKGELQR LATSARGEYE
QAKAAEDSIA KELAVQKALQ ASTSDKQVEL NELQRKATAA RDIYETVLKR SSQTSEEQNL
NQSNIRVISP AEPPVKADGP GKKILLIAGI IGGLLAGFVV GAGFAILAAL FSHPVVRSYF
SRSPATTA
|
|---|
| |