Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4005 |
Symbol | |
ID | 6982775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 4172895 |
End bp | 4173863 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643398734 |
Product | putative polysaccharide degradation protein |
Protein accession | YP_002283493 |
Protein GI | 209551576 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4124] Beta-mannanase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGC TGATGAAAAA GAACCTCTCC ACCGCAGCGA TCGCGCTGCT CCTGCTGTGT GCCGCGGATA TGCCCGGCCG AAGCGAGATG CAATATGCGG GCATAGCCCC GAACCCGGCA GCAAGCGTCA AGACGATCAT CGATAAACGC CCCGTTCTTC ATGCCGACGG CATCAGGTTC GGCGCCTACG ATCCGCATGG CGATTTCGGC GCACAATCGA ATGTCTCAAC CGAAGCGCTG TTCCTGCCCT GGGAAGACGT CGATCTGGAG ACGTTGCGCG TCGCCGATGC CTACGCGCAG GCCAGAGGCC GTAATCTGCT GATCACCGTG GAGCCGTGGT CCTGGGACGT CGACTGGCGG CTGACATCCA ACGAGCTTCG CCAAAAGGTT CTGCGCGGCG ACTACGATGT CAATATGCGG GCGATCGCGC AGATGATATC CCAGCTGAAA AGTCCGGTGA TCGTCCGCTG GGGCCAGGAG ATGGAGGACA AGTCTGGGCG GTTTTCGTGG TCCGGGTGGA ACCCGCGGGA CTATATCGCC GCCTATAAGC GGATGATGGA TATCGTCCGG CAGGAGGCGC CTGGCACGCA GATCATGTGG TCGCCGAAGG GCGAGCCGGG CTTGCAGGAC TACTATCCCG GTGACGATTA TGTCGATCTC GTCGGGCTCT CGGTCTTCGG CCTGGAACGC TACGACGAGC TTGCCTACGA CAAGCTTCGG ACGTTCTCCG AAGCGCTGAA GCAGGGTTAT GATCTCGTCG CCGGCTACGG CAAGCCGATC TGGGTGGCGG AGCTCGGCTA TCAAGGCGGC GACGCCTATG TCAGGCCCTG GATCGAAACC GCGACGCTGA AACAGAGCGC CTTTCCGAAC TTGCAGGAAG TCGTCTATTT CAACGATCGG GATGTGCACG CCTGGCCGTT CGATCTCGGC CGGCCGGATT GGCGCGTGGT CGATAGCATC AGCAACTGA
|
Protein sequence | MKKLMKKNLS TAAIALLLLC AADMPGRSEM QYAGIAPNPA ASVKTIIDKR PVLHADGIRF GAYDPHGDFG AQSNVSTEAL FLPWEDVDLE TLRVADAYAQ ARGRNLLITV EPWSWDVDWR LTSNELRQKV LRGDYDVNMR AIAQMISQLK SPVIVRWGQE MEDKSGRFSW SGWNPRDYIA AYKRMMDIVR QEAPGTQIMW SPKGEPGLQD YYPGDDYVDL VGLSVFGLER YDELAYDKLR TFSEALKQGY DLVAGYGKPI WVAELGYQGG DAYVRPWIET ATLKQSAFPN LQEVVYFNDR DVHAWPFDLG RPDWRVVDSI SN
|
| |