| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3812 |
|---|
| Symbol | |
|---|
| ID | 6982575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 3945413 |
|---|
| End bp | 3946954 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643398534 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_002283300 |
|---|
| Protein GI | 209551383 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4784] Putative Zn-dependent protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.685027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAGAA ACAGACTGGA GAGCTTGACG ACGTGGAAAT CGCCCGCGCT TTCCAGTGAT
GCCCTCTTCG CGCCCCGGCG CTTCGCGCGT CGCCTGATGC TGCTTTCGGC CGTCGCACTG
ACGCTTAATG GCTGTCAAAC GCTGATCGAG CAATCCTATC AGCCGAGCGT CTCGCCTTCT
TCCAATCCGC AGATCGTCGA CGAGGTGCAG AAGAACGACC CGCGCGCGGC GATGGGCGCC
CGCGAACATC CGCGCATCGT CGCAAGCTAC GGCGGCGAAT ACAAGGACGC CAAGACCGAG
CGCCTCGTCG CCCGCATCGC CGGCGCGCTG ACGGCGGTGT CTGAGAATCC GAGCCAGTCC
TACCGCATCA CCATCCTGAA TTCACCGGCG ATCAACGCCT TCGCGCTGCC GGGTGGTTAT
CTCTACGTCA CCCGCGGCCT GCTCGCCCTT GCCAACGACG CCTCCGAAGT CGCCGCCGTG
CTGTCGCACG AGATGGGCCA TGTGACGGCA AACCACGGCA TCGAGCGGCA GAAGCGCGAA
GAGGCTGAGG TCATCGCCAG CCGCGTCGTC GCCGAGGTCC TTTCCAGCGA TATCGCCGGC
AAGCAGGCAC TGGCCCGCGG CAAACTGCGC CTTGCCGCCT TCTCCCGCCA GCAGGAACTA
CAGGCCGATG TCATCGGCGT ACGGATGCTC GGCGAAGCCG GCTACGACCC CTATTCCGCT
GCCCGCTTTC TCGATTCCAT GGCGGCGTAC AGCCGCTTCA TGTCGGTCGA TCCCGAAGCC
GACCAGAGCC TCGACTTCCT GTCGAGCCAT CCGAATTCCG CCCAGCGCAT CGAGCTTGCC
CGCACCCATG CGCGGGCCTT CGGCCAGGAA GGGTCAGTCG GCGACAAGGG CCGCGACTAT
TATCTCGACG GCATAGACGG TCTGCTCTAC GGCGATAGCC CTGAGGAAGG CTATGTGCGC
GGCCAGACCT TCCTGCATGG AGGCCTCGGC ATCCGCTTCG ACGTGCCGCC GGACTTCCAC
ATCGACAACA AGGTCGAAGC CGTGATGGCC ACGGGCCCGA ACGACATCGC CGTCCGCTTC
GACGGCGTCG CCGACAATCA GAACCAGAGC CTCACCAACT ATATTTCCAG CGGCTGGGTG
ACCGGCCTCG ACCCGTCGAC CATCCAGCCG GTTACCATCA ACGGCATGGA AGCAGCCACA
GCACGCGCAA GTGCGGATCG CTGGGATTTC GATGTCACCG TGATCCGCAA CAATTCGCAG
ATCTTCCGTT TCCTGACCGC CGTGCCGAAA GGCAGCGACG CCCTCGAGCC GACCGCCAAT
GTCCTGCGCG CAAGTTTCCG GCGCATGACG CCGGCCGAGG CAGCCTCCCT GAAGCCGCTG
CGCATCCGTG TCGTCACCGT CCGGCCGGGT GAAAACATCT CGACGCTCGC CGCCCGCATG
ATGGGCACCG ACCGCAAGCT CGATCTCTTC AAACTCATCA ATGCCTTGCC CACGGGTGCA
GCCGTTTCAC CCGGCGATCG CGTCAAGATC ATCGCTGAAT AA
|
|---|
| Protein sequence | MRRNRLESLT TWKSPALSSD ALFAPRRFAR RLMLLSAVAL TLNGCQTLIE QSYQPSVSPS
SNPQIVDEVQ KNDPRAAMGA REHPRIVASY GGEYKDAKTE RLVARIAGAL TAVSENPSQS
YRITILNSPA INAFALPGGY LYVTRGLLAL ANDASEVAAV LSHEMGHVTA NHGIERQKRE
EAEVIASRVV AEVLSSDIAG KQALARGKLR LAAFSRQQEL QADVIGVRML GEAGYDPYSA
ARFLDSMAAY SRFMSVDPEA DQSLDFLSSH PNSAQRIELA RTHARAFGQE GSVGDKGRDY
YLDGIDGLLY GDSPEEGYVR GQTFLHGGLG IRFDVPPDFH IDNKVEAVMA TGPNDIAVRF
DGVADNQNQS LTNYISSGWV TGLDPSTIQP VTINGMEAAT ARASADRWDF DVTVIRNNSQ
IFRFLTAVPK GSDALEPTAN VLRASFRRMT PAEAASLKPL RIRVVTVRPG ENISTLAARM
MGTDRKLDLF KLINALPTGA AVSPGDRVKI IAE
|
|---|
| |