Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3626 |
Symbol | |
ID | 6982388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 3748434 |
End bp | 3750302 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643398350 |
Product | surface antigen (D15) |
Protein accession | YP_002283117 |
Protein GI | 209551200 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.427048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGTCG CGGCAGCAGC TGCGTTCTCA CCGGTCCTGA TCGGCGACGC TTACGCCTTC AAGCTTTTCG GCATCACCAT TTTCGGCAAG GACGAGGACG AAGCGCAGCA GGTGCCCGAT CCGGTGCGCT ATAACGTCGA TCTCAAAGCC GAAACCGCCG ATCCCGACCT GAAAGAAGCG CTGCAAAACA GCTCCCGCCT CCTCAGTGAC CAGAAGCTGC CGGTTTCCGG CGATCTCGGC GTCGTCGTCA AGGCGCGCGA CGACCGCGAG CGACTGATCG CAGCTCTCTA TGAAAAGGCC CGTTACGGCG GCGTGGTGAC GATCACGATC GACGGCAAGA ATATCGACGA CCTGCCGCCC AATCCGACAT TCGACCGGTC CGGGCCGGTC CCGGTCACCG TCGATATAAC GCCCGGCCCG ATCTTCAAGG TCAGGGAAGT GCAGTTCGGC GGCGATGCCG CAAACCACAA TCCCGCCGAT TACGATTTGG CCCCGGGCGC CCAGGCAGGC TCGCTTGCCA TCATCAAGGC CGGCGACAAG ATCGTCGAGC AGCTGAAGAG CGAGGGCCGG CCCTTCGCCA AGTTGACCGA ACGCAAGGTC GTCGCCGACC ACAGGAGTGA CACCGTCGAT ATCGTCCTTG CGGCCGAAGG CGGCCCGGTC GCCCCGATCG GCGATGTCGG CGTCACCGGC GAAAAAACCG TCAAGCCAGG GTTCATCCAG CGTTATTCCC GGCTCGACAA GGGCGAAGCC TATTCCCCGG AAGCGCTGAA AAAAGCCGGC GAGCGGCTTC GCGCCCTCGG CGTCTTCTCA AGCGTCACCA TCCACGAAGG CGATGCGCTG GCGCCGGATG GTACGCTGCC GATGACGATC GAGGTTTCCG AAGGCAAGCA GCGCTATTTC GGCGTCGGCG CCCAATATTC CACCACCGAC GGCTTCGGCG TCCAGGGCTA TTGGGGCCAT CGCAACCTGT TCGGCGAAGC CGAAACGCTG CGGATCGAGG GATCGGTGTC GCGGCTCGGC GAAACCACCG ATGTCGGCAG CCTCGACTAT TCCGCCGGCA TCCTCTTCAC CAAGCCCGGC GCCTTCTTCC CCGCCGCCAC GCTGAAGGCC GGCATCGTCG CCAAGACCGA AAATCCGGAT GCCTACAATG CGACGCTCGT CACCGCCTCG CTCGGCCTTT CCTACGAGCT GACCGACCGG GACACCGTCT CGGCAAGCGG CGAGGTCAGC TGGGAGCGCG ACGACGACGC CTTCGGCACC AACGACTACC TGACCTTCAC CCTGCCGCTG CAATATGACC GCGACGCCCG CGACGACAAG TTCAACCCGA CCGAGGGCTA TCGCGCGACA TTTTCGGCCA AGCCCGGTTA CGAGATCTTC AACGCCACGC CCTATGCGGC ATTCCAGGGC TCGATCTCCG GCTATCTGCC CTTCGGCGCC GAGGATGGCG TGGTGCTGGC CGGCAAGGTC GCCGCCGGTG TCCTGATCGG CGGCGGCGGC ATCGAGAATA TTCCGGCCAC GCAGCGCTTC TTTGCCGGCG GCGGCGGCTC CGTGCGCGGA TACAGCTTTC AAGAAATCTC GCCCTATAAC GACAATGGCG ACCCCACCGG CGGCCGCTCC TATATCACCG GTTCGCTGGA AGCCCGCATC AAGATCACCG ATACGATCGG CATCGTGCCC TTCATCGATG TCGGCACCGT ATCGGACAGC ACCTTTCCCG GTTTTTCGGA TATCCGCGCC GGCGCCGGCG CCGGAATACG ATATGCCACA CCTTTCGGCC CGCTGCGGCT TGATTTTGCC ATGCCGCTGA ACAAGTACGA AGGTGGCACA GATTATGGAA TCTACGCCGG CATCGGCCAA TCCTTCTAG
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Protein sequence | MVVAAAAAFS PVLIGDAYAF KLFGITIFGK DEDEAQQVPD PVRYNVDLKA ETADPDLKEA LQNSSRLLSD QKLPVSGDLG VVVKARDDRE RLIAALYEKA RYGGVVTITI DGKNIDDLPP NPTFDRSGPV PVTVDITPGP IFKVREVQFG GDAANHNPAD YDLAPGAQAG SLAIIKAGDK IVEQLKSEGR PFAKLTERKV VADHRSDTVD IVLAAEGGPV APIGDVGVTG EKTVKPGFIQ RYSRLDKGEA YSPEALKKAG ERLRALGVFS SVTIHEGDAL APDGTLPMTI EVSEGKQRYF GVGAQYSTTD GFGVQGYWGH RNLFGEAETL RIEGSVSRLG ETTDVGSLDY SAGILFTKPG AFFPAATLKA GIVAKTENPD AYNATLVTAS LGLSYELTDR DTVSASGEVS WERDDDAFGT NDYLTFTLPL QYDRDARDDK FNPTEGYRAT FSAKPGYEIF NATPYAAFQG SISGYLPFGA EDGVVLAGKV AAGVLIGGGG IENIPATQRF FAGGGGSVRG YSFQEISPYN DNGDPTGGRS YITGSLEARI KITDTIGIVP FIDVGTVSDS TFPGFSDIRA GAGAGIRYAT PFGPLRLDFA MPLNKYEGGT DYGIYAGIGQ SF
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