Gene Rleg2_3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3511 
Symbol 
ID6982265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3629270 
End bp3630403 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content60% 
IMG OID643398229 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_002283004 
Protein GI209551087 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG ATCCCGCATT GCGTGCCGTC AGCGCCGCCA GCCTGTTGCG CGAGGAATGG 
TTCCTGGGCG TCAGCGTCGC GACAAGCTTC GCATTTCTTG CTTTCCAGGA GCAGCTCTTC
GGCCGGCTTT CCGATCCGCT TTGGTTCACT GTCGTTTTCG GGTGGCTGTT TGCCGTCGTG
CTCGGCTCCG CTCTATCGGT CGTGCGGCAC GCAGACCACC TGGCGGAGCG GCTGAAGGAG
CCTTACGGCA CGCTCATTCT AACCCTTTCA ATCACGTCGA TCGAGGTGAT GGCAATATCG
GCCGTCATGC TTCACGGCGA AAACAATCCC ACGCTGGCGC GCGACACGCT GTTTGCAGTC
GTCATGATCA TTTTGAACGG CATGGTCGGC CTGTCATTGC TGCTCGGCGC GTGGCGGCGA
CCGGAACAGC AGCACAACCT GCAGGGCGCC AACGCCTATC TCGGAGTAAT CGTGCCGCTG
GCGACGCTCA GCCTAGTCAT GCCGACATTT CTGGCAGGTC CGGACGGACA GCATCCATCG
GCACCGAGAC AACTGATACT GGGCGTCATA TCGGTCGGAC TTTATTCCAC GTTTCTGTTT
CTTCAGGCCG GCCGCCATCG GGACTATTTC GCGGACGACG GCAACCGTCA GCAACCTCGC
AGCGAACATG TCGCTGGCCA TGGGCCGATC TGGCCGCATG CCATCCTGCT CGTCACCTAT
ATGGCTCCCG TCGTGTTCCT GGTCGAACAG CTTGCGCGGC CGATCGATTA CATTATCGAA
ACCCTGCATG CTCCAACCGC ATTTGGCGGT GTCGTGATGG CTATCCTCGT CGCCACGCCT
GAGGCAATCA GCGCCGTGCG CGCGTCTATC GCCAACAATC TTCAGCGCTC CGTAAACATT
TTCCTCGGTT CGGTATTGTC GACGATCGGG CTGACGGTGC CGGCGATGCT TGTTGTCAGC
CAGCTCTACG GACACAGCGT GACGCTCGGC CTGGAGCACG GAGATCTGGT GATGCTCCTG
CTCACGCTTG CCGTCAGCAT CATTACCTTC GCCAGCGGCC GCACGCATCT CATGCAAGGT
GCAGTCCATC TGGTGCTTTT CCTGGCCTAC GTGCTGCTCA TTTTCCAGCA GTGA
 
Protein sequence
MTDDPALRAV SAASLLREEW FLGVSVATSF AFLAFQEQLF GRLSDPLWFT VVFGWLFAVV 
LGSALSVVRH ADHLAERLKE PYGTLILTLS ITSIEVMAIS AVMLHGENNP TLARDTLFAV
VMIILNGMVG LSLLLGAWRR PEQQHNLQGA NAYLGVIVPL ATLSLVMPTF LAGPDGQHPS
APRQLILGVI SVGLYSTFLF LQAGRHRDYF ADDGNRQQPR SEHVAGHGPI WPHAILLVTY
MAPVVFLVEQ LARPIDYIIE TLHAPTAFGG VVMAILVATP EAISAVRASI ANNLQRSVNI
FLGSVLSTIG LTVPAMLVVS QLYGHSVTLG LEHGDLVMLL LTLAVSIITF ASGRTHLMQG
AVHLVLFLAY VLLIFQQ