Gene Rleg2_3423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3423 
Symbol 
ID6982177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3540127 
End bp3541287 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content62% 
IMG OID643398141 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002282916 
Protein GI209550999 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCATC TCTTGAAATC CTGCACGGCA GCGCTCGCCT GCCTGAGCTT CGCGACGCAG 
GTGATTGCCG CCGAGCCGCT GAAGGCGCTC GGCAAGGGCG AAGGAGCGGT CAGCATTGTC
GCTTGGGCCG GCTATATCGA ACGCGGCGAA ACCGACAAGA ACTACGACTG GGTGAGCGAT
TTCGAAAAGG AGACCGGCTG CAAGGTTTCC GTCAAGACCG CCGCCACCTC GGATGAAATG
GTATCGCTGA TGAACGAGGG CGGCTTCGAC CTCGTCACCG CATCGGGCGA CGCGTCGCTC
CGCCTCATCG CCGGCAAGCG TGTCCAGCCG ATCAACACCG ATCTGATCCC GAGCTTCAAG
ACGGTCGACG AGCGCCTGCA GAAAGGTCCG TGGTATACGG TCGGCGACGT GCATTACGGC
GTGCCCTATC TCTGGGGGCC GAATGTGCTG ATGTATAATA CCGATGCCTT CAAGGACAAG
GCGCCGACCA GCTGGAATGT CGTCTTCGAG GAGCAGACCC TGCCCGACGG CAAGTCGAAC
AAGGGCCGCG TCCAGGCCTA TGACGGCGCA ATCTATATCG CCGACGCCGC CCTGTACCTG
ATGGCCCACA AGCCGGATCT CGGCATCAAG GACCCTTACG AACTGACTGA AGACCAGTAC
AAGGCGGCCC TCGACCTGCT GCGCGGCCAG CGCAAGCTCG TCTCCCGCTA CTGGCACGAT
GCGATGATCC AGATCGACGA CTTCAAGAAT GAAGGCGTCG TCGCCTCCGG CTCCTGGCCT
TTCCAGGTCA ACCTGCTGCA GGCCGACAAG CAGAAGATCG CCTCCACATT CCCGGATGAA
GGCGTCACCG GCTGGGCCGA CACCACCATG CTGCATGTCG ACAGCGAACA TCCGAACTGC
GCCTATATGT GGATGGAGCA TTCGCTGCAG GCCAAGGTCC AGGGCGACGC CGCCGCCTGG
TTCGGCGCCG TGCCCTCGGT TCCCGCCGCC TGCAAGGGCA ACGAACTGAT GGGCGACGCC
GGCTGCGCCA CCAACGGCTT CGATCACTTC GACAAGATCA AGTTCTGGAA AACCCCGGTC
GCCAAATGCA CGACGCAGAG CGAATGCGTG CCCTATCATC GCTGGGTGTC GGATTATATC
GGCGTGATCG GCGGGCGGTA A
 
Protein sequence
MTHLLKSCTA ALACLSFATQ VIAAEPLKAL GKGEGAVSIV AWAGYIERGE TDKNYDWVSD 
FEKETGCKVS VKTAATSDEM VSLMNEGGFD LVTASGDASL RLIAGKRVQP INTDLIPSFK
TVDERLQKGP WYTVGDVHYG VPYLWGPNVL MYNTDAFKDK APTSWNVVFE EQTLPDGKSN
KGRVQAYDGA IYIADAALYL MAHKPDLGIK DPYELTEDQY KAALDLLRGQ RKLVSRYWHD
AMIQIDDFKN EGVVASGSWP FQVNLLQADK QKIASTFPDE GVTGWADTTM LHVDSEHPNC
AYMWMEHSLQ AKVQGDAAAW FGAVPSVPAA CKGNELMGDA GCATNGFDHF DKIKFWKTPV
AKCTTQSECV PYHRWVSDYI GVIGGR