Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3423 |
Symbol | |
ID | 6982177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 3540127 |
End bp | 3541287 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643398141 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002282916 |
Protein GI | 209550999 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCATC TCTTGAAATC CTGCACGGCA GCGCTCGCCT GCCTGAGCTT CGCGACGCAG GTGATTGCCG CCGAGCCGCT GAAGGCGCTC GGCAAGGGCG AAGGAGCGGT CAGCATTGTC GCTTGGGCCG GCTATATCGA ACGCGGCGAA ACCGACAAGA ACTACGACTG GGTGAGCGAT TTCGAAAAGG AGACCGGCTG CAAGGTTTCC GTCAAGACCG CCGCCACCTC GGATGAAATG GTATCGCTGA TGAACGAGGG CGGCTTCGAC CTCGTCACCG CATCGGGCGA CGCGTCGCTC CGCCTCATCG CCGGCAAGCG TGTCCAGCCG ATCAACACCG ATCTGATCCC GAGCTTCAAG ACGGTCGACG AGCGCCTGCA GAAAGGTCCG TGGTATACGG TCGGCGACGT GCATTACGGC GTGCCCTATC TCTGGGGGCC GAATGTGCTG ATGTATAATA CCGATGCCTT CAAGGACAAG GCGCCGACCA GCTGGAATGT CGTCTTCGAG GAGCAGACCC TGCCCGACGG CAAGTCGAAC AAGGGCCGCG TCCAGGCCTA TGACGGCGCA ATCTATATCG CCGACGCCGC CCTGTACCTG ATGGCCCACA AGCCGGATCT CGGCATCAAG GACCCTTACG AACTGACTGA AGACCAGTAC AAGGCGGCCC TCGACCTGCT GCGCGGCCAG CGCAAGCTCG TCTCCCGCTA CTGGCACGAT GCGATGATCC AGATCGACGA CTTCAAGAAT GAAGGCGTCG TCGCCTCCGG CTCCTGGCCT TTCCAGGTCA ACCTGCTGCA GGCCGACAAG CAGAAGATCG CCTCCACATT CCCGGATGAA GGCGTCACCG GCTGGGCCGA CACCACCATG CTGCATGTCG ACAGCGAACA TCCGAACTGC GCCTATATGT GGATGGAGCA TTCGCTGCAG GCCAAGGTCC AGGGCGACGC CGCCGCCTGG TTCGGCGCCG TGCCCTCGGT TCCCGCCGCC TGCAAGGGCA ACGAACTGAT GGGCGACGCC GGCTGCGCCA CCAACGGCTT CGATCACTTC GACAAGATCA AGTTCTGGAA AACCCCGGTC GCCAAATGCA CGACGCAGAG CGAATGCGTG CCCTATCATC GCTGGGTGTC GGATTATATC GGCGTGATCG GCGGGCGGTA A
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Protein sequence | MTHLLKSCTA ALACLSFATQ VIAAEPLKAL GKGEGAVSIV AWAGYIERGE TDKNYDWVSD FEKETGCKVS VKTAATSDEM VSLMNEGGFD LVTASGDASL RLIAGKRVQP INTDLIPSFK TVDERLQKGP WYTVGDVHYG VPYLWGPNVL MYNTDAFKDK APTSWNVVFE EQTLPDGKSN KGRVQAYDGA IYIADAALYL MAHKPDLGIK DPYELTEDQY KAALDLLRGQ RKLVSRYWHD AMIQIDDFKN EGVVASGSWP FQVNLLQADK QKIASTFPDE GVTGWADTTM LHVDSEHPNC AYMWMEHSLQ AKVQGDAAAW FGAVPSVPAA CKGNELMGDA GCATNGFDHF DKIKFWKTPV AKCTTQSECV PYHRWVSDYI GVIGGR
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