| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2239 |
|---|
| Symbol | |
|---|
| ID | 6980978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 2293048 |
|---|
| End bp | 2293662 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643396956 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_002281744 |
|---|
| Protein GI | 209549827 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.678713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTATA TCAATTCGCT CGCATTGCTC GTCAGCGTCT ACATCGCCTC CCTCGTCAGC
CCCGGACCGA ATTTCATCAT CGTCACCAAC ACAAGCATGA CGGTATCGCG CGCTGCCGGG
CTCTTCGCAG GTCTCGGACT TGCGATCGCA TCCCTGACCT GGGCCATCAT GGCGATGGCG
GGGCTCGGTT TTCTGCTGAC CCATTTCGAA TGGCTGCATG TGATGTTGCA GGTGGCCGGC
GCATTGTATC TGATCTGGCT GGGGTTGAAG ATGATCCGCA ACGCGGCGAA GCCCTTGAAG
CCGACGGGAC CGAGCGAAGT CTCCTGGCGC TCGGCCATGC GCCGCGCTTA CGTCGTCAGC
ATGACCAATC CGAAATCGGT GGCTTTCTTC GGCAGTATCT TTGCGCTTGT CATCCCGGCA
CATGCGCCCG TCTGGCTCTA TTGCCTCATC GCCCTGACCT GCTTCCTTCT TTCGGCTCTC
TGGTATTGCG GCCTGGCCTT TTTCTTTTCG AATCCGCGCG TTTCCGCCGG TTTCCTGCGC
TTCAAGGCCA GCATCGAGCG CGTGATGGGC GCCGCCCTGA TCTTGATCGG CGGCCGCCTG
CTCTTGGTTC GCTAA
|
|---|
| Protein sequence | MDYINSLALL VSVYIASLVS PGPNFIIVTN TSMTVSRAAG LFAGLGLAIA SLTWAIMAMA
GLGFLLTHFE WLHVMLQVAG ALYLIWLGLK MIRNAAKPLK PTGPSEVSWR SAMRRAYVVS
MTNPKSVAFF GSIFALVIPA HAPVWLYCLI ALTCFLLSAL WYCGLAFFFS NPRVSAGFLR
FKASIERVMG AALILIGGRL LLVR
|
|---|
| |