Gene Rleg2_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_2093 
Symbol 
ID6980832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp2152785 
End bp2153546 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content59% 
IMG OID643396815 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_002281603 
Protein GI209549686 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.446343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.467472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAC TCAGCTACCA GCTCTACAGC GCCCGTAATT TCCAGCCTTA TTCGGCGATT 
TTCGAAAAGC TCGGCAAGGC GGGTTATGCC GAAGTCGAGG GCTTCGGCGG CATTTATGCC
GATCTCGACG ATGCCGGCCT GAAGAGCCTT CGCGCCGATC TCGACAAGAA CGGCCTGGTC
ATGGCGACCG GCCATTTCAG CCCGGATTTC CTGGAGAGGG ACGTGCAGAA GTCGCTGAAC
ATTGCCAAGA TTCTCGGCAT GGATTCGATC TATGCGCCGC ATCTGGCAGC TGAGCAGCGC
CCCTCCGCCG CCGCCGGCTG GGTCGCCTTC GGCAAACGCC TGCAGGAGAT GAGCAAGCCA
TACAAAGAAG CCGGCTACGA ATTCGGCTGG CACAATCACG ATTTCGAATT CGTCAAGCTG
GCCGACGGCT CGCTGCCAAT CGAGCGCATC TTCGAGGGCG CGCCTGATAT TTCCTGGGAA
GCCGATATCG CCTGGGTCAT TCGCGGCAAT GCCGATCCTT TCGCCTGGAT CGAAAAGCTT
GGCTCGCGTA TCACCGCGGT GCATGTCAAG GACATCGCGC CGGCTGGCGA AGCCAAGGAC
GAAGACGGCT GGGCCGATGT CGGCCACGGC AAGGTGGAAT GGGGCAAGCT GATGACGGCC
CTGCGCGCCA CCAAGGCGAA GCACTTCGTC GTCGAACATG ATAATCCCAA AGACATCGAC
CGCAACATCA GCCGTTCGAT TGCATCCTTC CAGACTTATT GA
 
Protein sequence
MTKLSYQLYS ARNFQPYSAI FEKLGKAGYA EVEGFGGIYA DLDDAGLKSL RADLDKNGLV 
MATGHFSPDF LERDVQKSLN IAKILGMDSI YAPHLAAEQR PSAAAGWVAF GKRLQEMSKP
YKEAGYEFGW HNHDFEFVKL ADGSLPIERI FEGAPDISWE ADIAWVIRGN ADPFAWIEKL
GSRITAVHVK DIAPAGEAKD EDGWADVGHG KVEWGKLMTA LRATKAKHFV VEHDNPKDID
RNISRSIASF QTY