Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_2093 |
Symbol | |
ID | 6980832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 2152785 |
End bp | 2153546 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643396815 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_002281603 |
Protein GI | 209549686 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.446343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.467472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAC TCAGCTACCA GCTCTACAGC GCCCGTAATT TCCAGCCTTA TTCGGCGATT TTCGAAAAGC TCGGCAAGGC GGGTTATGCC GAAGTCGAGG GCTTCGGCGG CATTTATGCC GATCTCGACG ATGCCGGCCT GAAGAGCCTT CGCGCCGATC TCGACAAGAA CGGCCTGGTC ATGGCGACCG GCCATTTCAG CCCGGATTTC CTGGAGAGGG ACGTGCAGAA GTCGCTGAAC ATTGCCAAGA TTCTCGGCAT GGATTCGATC TATGCGCCGC ATCTGGCAGC TGAGCAGCGC CCCTCCGCCG CCGCCGGCTG GGTCGCCTTC GGCAAACGCC TGCAGGAGAT GAGCAAGCCA TACAAAGAAG CCGGCTACGA ATTCGGCTGG CACAATCACG ATTTCGAATT CGTCAAGCTG GCCGACGGCT CGCTGCCAAT CGAGCGCATC TTCGAGGGCG CGCCTGATAT TTCCTGGGAA GCCGATATCG CCTGGGTCAT TCGCGGCAAT GCCGATCCTT TCGCCTGGAT CGAAAAGCTT GGCTCGCGTA TCACCGCGGT GCATGTCAAG GACATCGCGC CGGCTGGCGA AGCCAAGGAC GAAGACGGCT GGGCCGATGT CGGCCACGGC AAGGTGGAAT GGGGCAAGCT GATGACGGCC CTGCGCGCCA CCAAGGCGAA GCACTTCGTC GTCGAACATG ATAATCCCAA AGACATCGAC CGCAACATCA GCCGTTCGAT TGCATCCTTC CAGACTTATT GA
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Protein sequence | MTKLSYQLYS ARNFQPYSAI FEKLGKAGYA EVEGFGGIYA DLDDAGLKSL RADLDKNGLV MATGHFSPDF LERDVQKSLN IAKILGMDSI YAPHLAAEQR PSAAAGWVAF GKRLQEMSKP YKEAGYEFGW HNHDFEFVKL ADGSLPIERI FEGAPDISWE ADIAWVIRGN ADPFAWIEKL GSRITAVHVK DIAPAGEAKD EDGWADVGHG KVEWGKLMTA LRATKAKHFV VEHDNPKDID RNISRSIASF QTY
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