Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1666 |
Symbol | |
ID | 6980403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1696861 |
End bp | 1697550 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643396391 |
Product | isochorismatase hydrolase |
Protein accession | YP_002281181 |
Protein GI | 209549264 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.152838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTAAGC TCGAAGTCTT GACCCCGGCA AACAGCCAGC TCATCTTCAT CGACCAGCAG CCGCAGATGG CTTTCGGCGT GCAGTCGATC GACCGTCAGA CGCTGAAGAA CAACGTCGTC GGTCTCGCCA AGGCTGCGAA GATCTTCAAA GTTCCGACCA CGATCACAAC GGTCGAGACG TTGTCATTCT CGGGCAACAC CTTTCCGGAA CTGCTTTCCG TCTATCCGGA GAACGACATC CTCGAGCGTA CCTCGATGAA TTCCTGGGAC GACCAGAACG TTCGTGATGC GCTGGCAAAG AATGCCGCCA TTGGCCGCAG GAAGATCGTG GTGTCTGGCC TTTGGACGGA AGTCTGCAAC ACGACCTTCG CGCTTTCCGC CCTCCACGAC ATTCCTGACT ATGAAATCTA CATGGTCGCG GACGCCTCCG GCGGCACTTC GGCCGACGCG CATAAGTACG CGATGGACCG GATGGTGCAG GCTGGCGTGA TCCCGGTCAC CTGGCAGCAG GTTCTGCTCG AATGGCAGCG CGACTGGGCT CGTAAGGAGA CTTACGACGC GGTCACCACG CTCGTGAAGG AGCATTCCGG CGCCTACGGC ATGGGGATCG ACTATGCCTA CACGATGGTT CACGGCGCCG ACGAACGCGT CAAGCATGGC AACCGCATCG GCCCGAACCC CGCAAAGTAA
|
Protein sequence | MSKLEVLTPA NSQLIFIDQQ PQMAFGVQSI DRQTLKNNVV GLAKAAKIFK VPTTITTVET LSFSGNTFPE LLSVYPENDI LERTSMNSWD DQNVRDALAK NAAIGRRKIV VSGLWTEVCN TTFALSALHD IPDYEIYMVA DASGGTSADA HKYAMDRMVQ AGVIPVTWQQ VLLEWQRDWA RKETYDAVTT LVKEHSGAYG MGIDYAYTMV HGADERVKHG NRIGPNPAK
|
| |