Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1498 |
Symbol | |
ID | 6980228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1530426 |
End bp | 1531283 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643396219 |
Product | phytoene synthase protein |
Protein accession | YP_002281016 |
Protein GI | 209549099 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.587215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGAAG CGAAGCCTGC GACGAACCAG GAGACCTGCC TGGCGATGCT GCGCGACAGC GATCGCGACC GCTACCTTGC CTGCCTGCTG TCGCCGGAGG ACAAGCGCGG CGCGCTTGCA GCCCTCTACG CCTTCAATGC CGAGCTTGCC CGCATTCGCG ATCTCGTGCA CGAGCCGTTG CCCGGCGAGG TGCGGCTGCA ATACTGGCGC GACCTGCTGG AAGGCAGCGC CCATGGTTCG ACGGCGGCCA ATCCCGTCGC TTCAGCACTT CTGACGGCGA TCGAGACGCA CCGCCTGCCG CGCAAGACGC TGATCGACAT GATCGAGGCC CGCACCTTCG ATCTCTACGA CGATCCGATG GAAACGCGTC TGTCGCTCGA AGGGTATGCC GGCGAGACGG CATCGGCCCT CATTCAGCTC GCAAGCCTGG TGCTTTCGCC CGAGGAAGCC GCACGATCGG CCGACGCCGC CGGTCATGCC GGTGTAGCCC AGGCGGTCGC CGGCCTGTTG CTGCTGATGC CGCTCTATCG CCGCCGCGGC CAGGTCTATA TTCCGCTGCA GATCCTGTCC GCCACCGGTC TCAACCGCGA TACCTTCCTT GCCGGCGAAG ACCGGCAGCG CATTTCCGCC GCCATCGAAG CCTTTGCCGG CCTCGGTCGC GAACATCTGG CAAAGGCGAG GGCGGCAGGG CCGATCGCGC CCGCGGTCTT TCCGGCCTTC CTGCCGGCGA CGCTTGCCGA ACCGGTGCTT TTCAGGGCGC AGAAGCTCGG CGCTGTCCTG TTCGACCGGC CGCTGCAGCC GCCGCAATGG CGCCGTCAGC TTAGTATGGC CCTCTCGGCC GTCCGCAGAA AAATCTGA
|
Protein sequence | MVEAKPATNQ ETCLAMLRDS DRDRYLACLL SPEDKRGALA ALYAFNAELA RIRDLVHEPL PGEVRLQYWR DLLEGSAHGS TAANPVASAL LTAIETHRLP RKTLIDMIEA RTFDLYDDPM ETRLSLEGYA GETASALIQL ASLVLSPEEA ARSADAAGHA GVAQAVAGLL LLMPLYRRRG QVYIPLQILS ATGLNRDTFL AGEDRQRISA AIEAFAGLGR EHLAKARAAG PIAPAVFPAF LPATLAEPVL FRAQKLGAVL FDRPLQPPQW RRQLSMALSA VRRKI
|
| |