Gene Rleg2_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1498 
Symbol 
ID6980228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1530426 
End bp1531283 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content67% 
IMG OID643396219 
Productphytoene synthase protein 
Protein accessionYP_002281016 
Protein GI209549099 
COG category[I] Lipid transport and metabolism 
COG ID[COG1562] Phytoene/squalene synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.587215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAAG CGAAGCCTGC GACGAACCAG GAGACCTGCC TGGCGATGCT GCGCGACAGC 
GATCGCGACC GCTACCTTGC CTGCCTGCTG TCGCCGGAGG ACAAGCGCGG CGCGCTTGCA
GCCCTCTACG CCTTCAATGC CGAGCTTGCC CGCATTCGCG ATCTCGTGCA CGAGCCGTTG
CCCGGCGAGG TGCGGCTGCA ATACTGGCGC GACCTGCTGG AAGGCAGCGC CCATGGTTCG
ACGGCGGCCA ATCCCGTCGC TTCAGCACTT CTGACGGCGA TCGAGACGCA CCGCCTGCCG
CGCAAGACGC TGATCGACAT GATCGAGGCC CGCACCTTCG ATCTCTACGA CGATCCGATG
GAAACGCGTC TGTCGCTCGA AGGGTATGCC GGCGAGACGG CATCGGCCCT CATTCAGCTC
GCAAGCCTGG TGCTTTCGCC CGAGGAAGCC GCACGATCGG CCGACGCCGC CGGTCATGCC
GGTGTAGCCC AGGCGGTCGC CGGCCTGTTG CTGCTGATGC CGCTCTATCG CCGCCGCGGC
CAGGTCTATA TTCCGCTGCA GATCCTGTCC GCCACCGGTC TCAACCGCGA TACCTTCCTT
GCCGGCGAAG ACCGGCAGCG CATTTCCGCC GCCATCGAAG CCTTTGCCGG CCTCGGTCGC
GAACATCTGG CAAAGGCGAG GGCGGCAGGG CCGATCGCGC CCGCGGTCTT TCCGGCCTTC
CTGCCGGCGA CGCTTGCCGA ACCGGTGCTT TTCAGGGCGC AGAAGCTCGG CGCTGTCCTG
TTCGACCGGC CGCTGCAGCC GCCGCAATGG CGCCGTCAGC TTAGTATGGC CCTCTCGGCC
GTCCGCAGAA AAATCTGA
 
Protein sequence
MVEAKPATNQ ETCLAMLRDS DRDRYLACLL SPEDKRGALA ALYAFNAELA RIRDLVHEPL 
PGEVRLQYWR DLLEGSAHGS TAANPVASAL LTAIETHRLP RKTLIDMIEA RTFDLYDDPM
ETRLSLEGYA GETASALIQL ASLVLSPEEA ARSADAAGHA GVAQAVAGLL LLMPLYRRRG
QVYIPLQILS ATGLNRDTFL AGEDRQRISA AIEAFAGLGR EHLAKARAAG PIAPAVFPAF
LPATLAEPVL FRAQKLGAVL FDRPLQPPQW RRQLSMALSA VRRKI