Gene Rleg2_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1188 
Symbol 
ID6979908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1199448 
End bp1199966 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content61% 
IMG OID643395901 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002280708 
Protein GI209548791 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.814089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.762073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGGG AATCGAAGGC GGTGATCAAT ATCGCCGATC TCAAGCTCGA CCACTGGAAA 
CAGGGCGCGC TCTATGAAAG CGTCGACACG TCGTTCGGCA CGCTTCTCGG CCTGACCGGC
CTCGGCATCA GCTACAACGA AGTGCCGCCG GGCAAATCGG GCTGCCCCTT CCACAACCAC
CATGTCGAAG ACGAGCTATT CTACGTGATT TCAGGCACCG GCGAATACCG CTTCGGCGAC
GAGCGCCATG CGATCAAGGC GGGCGACGCG CTCGGCGCAC CGGCCGGCGG CCCGGAAACG
GCGCACCAGA TCATCAACAC CGGCACGGCT CCGCTCGTCT ATCTCGGCAT CTCGACAATG
GCGAAGACCG AGATCGTCGA ATATCCGGAT TCCGGAAAGT TTCTTGCCAA GACAAACAGG
GCCAAAACAA ACGAGGAAGG TTCCGAACCT CTGCGCTTCC GCCATATCTG CCGGCCGGAA
AGCGATCTCG ACTATTGGGA CGGCGAACCC GGCGCTTGA
 
Protein sequence
MARESKAVIN IADLKLDHWK QGALYESVDT SFGTLLGLTG LGISYNEVPP GKSGCPFHNH 
HVEDELFYVI SGTGEYRFGD ERHAIKAGDA LGAPAGGPET AHQIINTGTA PLVYLGISTM
AKTEIVEYPD SGKFLAKTNR AKTNEEGSEP LRFRHICRPE SDLDYWDGEP GA