Gene Rleg2_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0862 
Symbol 
ID6979580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp881669 
End bp882457 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID643395573 
Productpolysaccharide deacetylase 
Protein accessionYP_002280382 
Protein GI209548465 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.539774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTA TCCTGCTCGC TTCGGCGTTC CTGTTGGTTG CCCTCTCCGC CGCATCGGCG 
GACGAATTGC CGTCAGCGCC CTTGGCCGCA CGTCCGGCCC CGACGGCGCC TGAAGTAAAG
CTCGTCGAGC CGCATCTGCA TATTGCCCGT TCCAATATCG CCGGCCATGC CCGCATCGCG
CTGACCTTCG ATGCCTGCAT GGGGCAGGCG GATGAGCGCA TCCTGTCGAC GCTGGTGCGG
GAACGCATCC CGGCGACGAT CTTCGTCACC GCCCGCTGGC TGAAGCACAA TCCCGCGGCT
CTCGCCGTGT TCCTGCAGAA CCCGGATCTC TTCGAACTCG AAAATCACGG AGAGAACCAT
ATCCCGGCCG TCGACACGCC GACGCTGGTC TATGGCATCG CCTCGGCCGG CTCGCCGCAG
GCGGTGAAGC AGGAGGTCGA GGGCGGCGCC GCAGCCATGA CCGCGGCCGG CATTCCCGCG
CCCCATTGGT TCCGCGGCTC GACCGCCAAA TATGACCTGT CCGCCATCGG CGAAATCCGC
GCCATGGGCT ATCGCATCGC CGGTTATTCG GTGAACGGCG ACGGCGGCTC GCTGCTCGGC
GCCGTCATCA CCGAAAAGCG CATCGCCTCG GCCAAGGACG GCGACGTCGT TATCTCCCAC
ATCAACCAAC CGACCCATGC GGCGGGCGAG GGGGTGGCGA AGGCGCTGGT CGATCTGAAA
GCCAAGGGCA CGGAGTTCGT TCGTCTGGAG GATGTCGAGG ATATGGGTGA CGATCGGACG
ACTGAGTAA
 
Protein sequence
MNRILLASAF LLVALSAASA DELPSAPLAA RPAPTAPEVK LVEPHLHIAR SNIAGHARIA 
LTFDACMGQA DERILSTLVR ERIPATIFVT ARWLKHNPAA LAVFLQNPDL FELENHGENH
IPAVDTPTLV YGIASAGSPQ AVKQEVEGGA AAMTAAGIPA PHWFRGSTAK YDLSAIGEIR
AMGYRIAGYS VNGDGGSLLG AVITEKRIAS AKDGDVVISH INQPTHAAGE GVAKALVDLK
AKGTEFVRLE DVEDMGDDRT TE