| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0247 |
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| Symbol | |
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| ID | 6978961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 250278 |
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| End bp | 251993 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643394960 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_002279773 |
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| Protein GI | 209547856 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA TTTCCATAAA ACCACCGCGA CCACCGACAC AGCTCGTTGT TGCGCTCCGG
GCTTGCGCCG GGGCCTTCGG GTTGGTCTTC CTTTACAGCT GCGGCTATAA TCTTTTTCTT
CTCACGCCTT CCATCTATCT CCTGCAGATC TACGACAGGG TCCTGTCGAG CCGAAGCGTC
GACACGCTGC TGATGCTGAC GATGATCATC GCCATCGCCG TGTTGGTCGG GTCGACGCTC
GATATCGTGC GCAGGGCAGC TCTTTCGCGC ATCGGCAGCT GGCTGGACCA TAGGCTGCGG
CCCATGGTGC TCACCGCATC GTTCGAATAT GCCGCTCGCG CCGATACGGG AGCCGCCTCG
GAGTGCTACA GGGATCTCGC CGCATTGCGC CAGTTCCTCG ATTCACCGGC CAGCTCGCTT
CTGTTCGACG TTCCCTGGGC GCCGGTATTC CTGCTTCTGC TCTTTCTTGT TCACCCGCTG
CTTGGGACCA TCGGTCTTCT GTGCGCCGTT GCGCTGCTGC TGTTTGCGTT GGCAACGGAA
CTGGCGACGC GGGCGCCGCT TGCCCACGCC AATCTTGCCC TTTCGAGGAG CTATCTGCGA
TTTGCGAGCG CGCTGAAAAA CATCGAGGTG ATCCGGGCCA TGGGCATGCA GGACGGTGCA
GCCCTGATCG TCTATCGCGA TGCGGAAATG GCAAGAAGGG CCCAGGACAT CGCGATGCAT
CGCACGGAGA TCATCCTTGG TTTCTCCAAA TCGATCCGCA CCTTGGCGCA GATCCTGATG
ATGGGATCGG CGACCTGGCT GGTGCTCGTC AACAGCGGCA GTCCCGGAAT CATCTTCGTC
GCCAGCCTGC TGCTCGGGCG CGGGCTCGCA CCGATCGAGG GCGCAATAGG GGCATGGCGC
TCCTTCATGT TTGCGCGCAA TGCCTTCAAT CGCTTGAACA GAATGCTGAT AACAATTGCA
TCGGAATGCG ATGCCCGCAT GGTGCCGCTG CCGGAACCCA ATGGCCTGGT TCTCGATAAT
GTCAGCTATT TCAAGCCATT CGCCGATCGG CCGATATTGA CCGATATCAC ATTGCGCCTG
GCACCTGGCG ATTGCATTGC GCTCATCGGT CCGTCGGGAT CGGGAAAATC GACACTGGGC
CGCATCATGG CAGGTGTTGT GCCGGCAACG AGCGGATATG CTCTTCTCGG CGGGGTCGAT
ATCTCGGCTC TGCGTCTTTG CGGGGGGACC TGCCACGTCG GATATCTGCC GCAGGATATC
GAACTCTTCG GCGGAGCAAT CAAGGATGTG ATCGGCCGGC TGGACGGAGG AGATCCCGGC
AAGGCAATCG ACGCCGCAAA GCTGGTTGGA TTGCACGACG CGATCATGCG GCTGCCGCAG
GGCTACGAGA CCGATATCGG TGAAGGGGGA AACCTGCTCC TTCGGGCTCA GCGCCAACAG
CTGGGGCTGG CACGGGCGGC TTACGGAAAT CCGTCCCTCA TCGTTCTCGA TGATCCGAAT
TCGAGCCTGG ATTATGACGG CGAACGCATG CTGTTTACGG CAATCGAGCG GATGAGATCC
CGGGGGATGA CCGTCGTTAT CATAACCCAC CGGATGGGCA TCCTGCCGGT CACCAACAAG
ATTGCCATCA TGCGCAACGG CACGGTGGCT GCCTTCGGCG ACAGCGAGCG GATTTATGAA
ACCTATCTTC AACCACCGGC GCGAACGGGA AGCTAG
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| Protein sequence | MTTISIKPPR PPTQLVVALR ACAGAFGLVF LYSCGYNLFL LTPSIYLLQI YDRVLSSRSV
DTLLMLTMII AIAVLVGSTL DIVRRAALSR IGSWLDHRLR PMVLTASFEY AARADTGAAS
ECYRDLAALR QFLDSPASSL LFDVPWAPVF LLLLFLVHPL LGTIGLLCAV ALLLFALATE
LATRAPLAHA NLALSRSYLR FASALKNIEV IRAMGMQDGA ALIVYRDAEM ARRAQDIAMH
RTEIILGFSK SIRTLAQILM MGSATWLVLV NSGSPGIIFV ASLLLGRGLA PIEGAIGAWR
SFMFARNAFN RLNRMLITIA SECDARMVPL PEPNGLVLDN VSYFKPFADR PILTDITLRL
APGDCIALIG PSGSGKSTLG RIMAGVVPAT SGYALLGGVD ISALRLCGGT CHVGYLPQDI
ELFGGAIKDV IGRLDGGDPG KAIDAAKLVG LHDAIMRLPQ GYETDIGEGG NLLLRAQRQQ
LGLARAAYGN PSLIVLDDPN SSLDYDGERM LFTAIERMRS RGMTVVIITH RMGILPVTNK
IAIMRNGTVA AFGDSERIYE TYLQPPARTG S
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