| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5595 |
|---|
| Symbol | |
|---|
| ID | 6978689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | - |
|---|
| Start bp | 1239843 |
|---|
| End bp | 1241351 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643394693 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_002279511 |
|---|
| Protein GI | 209547593 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCGC CCGACGCCGA CTTCATCATC ATCGGCAGCG GCCCTGCGGG CGTCTCCGCT
GCCTTTCCGC TGATAGCGGC CGGCCGTCGC GTTCTGATGC TGGATGCCGG CGATGACGCC
GGATCGCAGG AGGAAAACCG CAGCGTCCGT GTCCTCGGAA GCGATCTGGA ATCGCTGCGC
GCCGACGACG GCAGCTCGCC GAAACTGCAG ACCCCTGTAT CACGCGGGAT TCTCGAACGT
TTCACACGCG ACGCCGGCAT ATCAGGTGAC GGCTTCAAAC CGATTGGCAG CCTCGCGCGC
GGCGGGCTCT CCAATATCTG GGGTGCGCAA GTCAGCTATC TCGACGCTGG GGATATTGCC
GATTGGCCGA TCGACCTCGC TTCCCTGCAG GGCTCTTACG AGCGGGTATC CCAGCGCATC
GGGATCAGCA CCAACGCCGA TTTTACCACA GGGGCCAACA GCGAAGCTAC CCTGCCGCTT
GGTGCGACGG CCGCCGATGT TCTTCGTCGG CACAAGGCTG CTAAACCGGC GGATGGGTCG
TTTCGGCTTT TTGCCGCCGC CAACGCCATA CTATCCGAGG CGAGGCCCGG ACGGGCGGCG
TGCGATCTGC GCGGCGATTG TCTCTATGGC TGCCCGAGCG GCGCCATCTA TAACAGCCGG
CAGGATCTGC TTGCGTTGCG AAAGTCACCG CATTTTCGTT TGCTCGACAT GCAAGCGGTC
TCCTTGGCAC GGGATTCGGG CTGGACGGTC AAAACGGCCG ACGGCTCGTC GTTTTCCGCA
CCGCGGATCA TTCTTGCCGC AGGGGTGCTC GGAACGGCCG CCCTGCTGGC CGATCTCCTG
CCGATCGGCG GGAAGGGATT GCGTCTGCTG AACAGCCCCA CGCTGGCCAT TCCCCTGCTC
TCTCCCGCGC GATTGCTGCG TTCGCCGACG CCGACGCACA GCCTTGCGCA GCTCGGATTG
TCTCTGCGTT ATGGAGACGG CGCATCCGAT TACGTGACGG GCGCGATCTA TGAAATAGGG
TCCCTGCCGG CGCAGAGTTT CGTCAACAGG ATGCCGCTCG GCCGAAAGGC CGGGCGAGCC
GCGTTCGAAC TTATCGCCGG CAGCCTTCTC GTCGCGACGA TCTATTATCC CGGCGATCAA
AGCCGCAGTT CCATCCATCG GGATGCGATG GCGAAAAAAG GGCTGACCAT CCGCGGCGGC
TTCGCGGAAG GTTTCGAGAT CCGCGCCGAG GCATTGAAAA AAGCGCTGCG CCGTGAATGG
AAACGATTGG GTCTTATTCC GCTCCCGGGC GCATCGCTGG CGGAGCCTGG TATCGACGCC
CATTTCGCCG GAACTCTGCC GATGGGCGAA TCCGGCCCAT TTGGCACCTC CCCCGTGGGA
GAATTGAACC TGCATCCGGG TCTTTACGTC GTCGACGGCT CCATTCTTCC CGATCTCTCC
TCGAAATACA TCACCATGAC GATCATGGCC AATGCCGATC GCATCGCCCA TCGTCTTGCC
GCATTGTAA
|
|---|
| Protein sequence | MNAPDADFII IGSGPAGVSA AFPLIAAGRR VLMLDAGDDA GSQEENRSVR VLGSDLESLR
ADDGSSPKLQ TPVSRGILER FTRDAGISGD GFKPIGSLAR GGLSNIWGAQ VSYLDAGDIA
DWPIDLASLQ GSYERVSQRI GISTNADFTT GANSEATLPL GATAADVLRR HKAAKPADGS
FRLFAAANAI LSEARPGRAA CDLRGDCLYG CPSGAIYNSR QDLLALRKSP HFRLLDMQAV
SLARDSGWTV KTADGSSFSA PRIILAAGVL GTAALLADLL PIGGKGLRLL NSPTLAIPLL
SPARLLRSPT PTHSLAQLGL SLRYGDGASD YVTGAIYEIG SLPAQSFVNR MPLGRKAGRA
AFELIAGSLL VATIYYPGDQ SRSSIHRDAM AKKGLTIRGG FAEGFEIRAE ALKKALRREW
KRLGLIPLPG ASLAEPGIDA HFAGTLPMGE SGPFGTSPVG ELNLHPGLYV VDGSILPDLS
SKYITMTIMA NADRIAHRLA AL
|
|---|
| |