Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5402 |
Symbol | |
ID | 6978496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 1044700 |
End bp | 1045614 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643394504 |
Product | Nickel-transporting ATPase |
Protein accession | YP_002279322 |
Protein GI | 209547404 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.997864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00986644 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAGTT TCATCGGCAA ACGCGCGATC GCCAGCGGCG CATCGCTCGT GGTGCTTATC GTCATCGTGT TCTTCCTGTC CCGGCTAACC GGCGATCCGA CCGATCTCTA CCTGCCGATT GATGCGACCA CGGAAATGCG CCAGCAATTC CGCGAAATGA ACGGGTTCAA CGACCCGTTG ATCATCCAGT TCGGCCGTTA TGTTGCGGAT CTCGCGCAGG GCAACTTCGG TCAGTCGCTG CGGCAGGCCC GTCCTGCCAT GGATGTGGTG CTAGAGGCCT TCGTCTGGAC CTTCTGGCTG GCTGTCATCA CCATGACGCT GGTCACGGTT GCTGCGATCG TCATTGGTTC GCTCGCGGCG TTTCGCGTCG GCGGTGTCTT CGATCGTTTT GCCACCTTCT TCTCGCTGAT CGGTGCTGCG GCCCCGGATT TCTGGCTTGC CATCGTGGCG ATCGTCATTT TCGCCGTCAA ACTTCATGTC CTGCCGACAT CCGGAACGGG AACCTTCTGG CACTGGGTCC TGCCGGTCAG CGTGTTGTTC ATCCGGCCCT TCGGCCTGAT CCTGCAGGTG GTGCGCGGCT CGATGATCAG CGTTCTGTCT TCCGCCTACG TGAAGACGGC GCGCGCCAAG GGCGTCCGTT CCAACTCGAT CATCTTCGTT CACGGATTGC GCAACGCCAT GCTGCCGGTG ATCACCGTCA TCGGCGACCA GGCCGCCGCC ATCTTGAACG GTGCCGTCGT CGTCGAGACG GTGTTCGGTT TTCCGGGAAT CGGCAAGCTG ATGATCGATT CGATCCTGCT TCGCGATTTC GCCGTCGTGT TGGCCGTCAT CATGGTCTCG GCATTGGCGA TCTTCATCAT GAACCTGTTG ATCGACATTG CCTATGCGCT GCTCGATCCG CGCATCCGGT ATTGA
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Protein sequence | MKSFIGKRAI ASGASLVVLI VIVFFLSRLT GDPTDLYLPI DATTEMRQQF REMNGFNDPL IIQFGRYVAD LAQGNFGQSL RQARPAMDVV LEAFVWTFWL AVITMTLVTV AAIVIGSLAA FRVGGVFDRF ATFFSLIGAA APDFWLAIVA IVIFAVKLHV LPTSGTGTFW HWVLPVSVLF IRPFGLILQV VRGSMISVLS SAYVKTARAK GVRSNSIIFV HGLRNAMLPV ITVIGDQAAA ILNGAVVVET VFGFPGIGKL MIDSILLRDF AVVLAVIMVS ALAIFIMNLL IDIAYALLDP RIRY
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