Gene Rleg2_5402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5402 
Symbol 
ID6978496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1044700 
End bp1045614 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content60% 
IMG OID643394504 
ProductNickel-transporting ATPase 
Protein accessionYP_002279322 
Protein GI209547404 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.997864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00986644 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAGTT TCATCGGCAA ACGCGCGATC GCCAGCGGCG CATCGCTCGT GGTGCTTATC 
GTCATCGTGT TCTTCCTGTC CCGGCTAACC GGCGATCCGA CCGATCTCTA CCTGCCGATT
GATGCGACCA CGGAAATGCG CCAGCAATTC CGCGAAATGA ACGGGTTCAA CGACCCGTTG
ATCATCCAGT TCGGCCGTTA TGTTGCGGAT CTCGCGCAGG GCAACTTCGG TCAGTCGCTG
CGGCAGGCCC GTCCTGCCAT GGATGTGGTG CTAGAGGCCT TCGTCTGGAC CTTCTGGCTG
GCTGTCATCA CCATGACGCT GGTCACGGTT GCTGCGATCG TCATTGGTTC GCTCGCGGCG
TTTCGCGTCG GCGGTGTCTT CGATCGTTTT GCCACCTTCT TCTCGCTGAT CGGTGCTGCG
GCCCCGGATT TCTGGCTTGC CATCGTGGCG ATCGTCATTT TCGCCGTCAA ACTTCATGTC
CTGCCGACAT CCGGAACGGG AACCTTCTGG CACTGGGTCC TGCCGGTCAG CGTGTTGTTC
ATCCGGCCCT TCGGCCTGAT CCTGCAGGTG GTGCGCGGCT CGATGATCAG CGTTCTGTCT
TCCGCCTACG TGAAGACGGC GCGCGCCAAG GGCGTCCGTT CCAACTCGAT CATCTTCGTT
CACGGATTGC GCAACGCCAT GCTGCCGGTG ATCACCGTCA TCGGCGACCA GGCCGCCGCC
ATCTTGAACG GTGCCGTCGT CGTCGAGACG GTGTTCGGTT TTCCGGGAAT CGGCAAGCTG
ATGATCGATT CGATCCTGCT TCGCGATTTC GCCGTCGTGT TGGCCGTCAT CATGGTCTCG
GCATTGGCGA TCTTCATCAT GAACCTGTTG ATCGACATTG CCTATGCGCT GCTCGATCCG
CGCATCCGGT ATTGA
 
Protein sequence
MKSFIGKRAI ASGASLVVLI VIVFFLSRLT GDPTDLYLPI DATTEMRQQF REMNGFNDPL 
IIQFGRYVAD LAQGNFGQSL RQARPAMDVV LEAFVWTFWL AVITMTLVTV AAIVIGSLAA
FRVGGVFDRF ATFFSLIGAA APDFWLAIVA IVIFAVKLHV LPTSGTGTFW HWVLPVSVLF
IRPFGLILQV VRGSMISVLS SAYVKTARAK GVRSNSIIFV HGLRNAMLPV ITVIGDQAAA
ILNGAVVVET VFGFPGIGKL MIDSILLRDF AVVLAVIMVS ALAIFIMNLL IDIAYALLDP
RIRY