| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5306 |
|---|
| Symbol | |
|---|
| ID | 6978400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | - |
|---|
| Start bp | 936244 |
|---|
| End bp | 937524 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643394410 |
|---|
| Product | type III effector Hrp-dependent outers |
|---|
| Protein accession | YP_002279228 |
|---|
| Protein GI | 209547310 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.795374 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTT TGCTCGGATC AATCGCCGAC GACTATACGG GCGCGTCCGA CCTCGCCAAT
ACGCTGACGA AGAACGGTCT GCGCACGGTG CAGACGGTCG GCATCCCCGA TCCGTCGCTC
GCTCTGCCTG ATGTGGACGC CGTCGTCGTT TCCCTGAAGA TCCGCTCCGT CCCGGCTTCG
GACGCGGTGA CGGCCGCAAC CAGCGCCGAG CGATGGCTGC GCCAGCGGGG CGCGAGCCAT
GTGCTCTACA AGATCTGTTC GACCTTCGAT TCCACCGATG CCGGCAATAT CGGGCCGGTC
ACCAAGGCAT TGAGCGATGC GGCGGGCGGC GGCATCGTGC TGGTCACTCC AGCCTTCCCG
GAAACGGGTC GCACCGTCTA TCTCGGACAT CTCTTCGTCG GCGGACAGCC GTTGAACGAA
AGCCCGCTCA AGGACCATCC CCTCAACCCG ATGCATGACG CCAATCTGGT GCGGGTTCTC
ACCCGGCAAT CACATGGCGC TGTCGAGCTG ATCGATCTCA CGGCCATCGC GGCCGGACCC
GGCGTCGTCA AAGCGAGGCT CGAGGCCCTC AGCGCGGCCG GCGTCACCGC TGCCGTCGCC
GATGCGATTT TCGAGCGGGA TCTTGAAACG CTCGGCGAGG TCGCATTGGA AACGCCGGTG
TCCACCGGCG CCTCCGGGCT CGGCCTCGGC CTTGCCCGCG CGCTCGTCCG CTCCGGCCGG
ATATCGTCCG GTGGCGCAGC CCCGACGGAT GCCATTCGCC CGGTGGGCGG ACTTTCCGCA
ATCGTTGCCG GCAGTTGTTC CAAGGCAACG CTGCGCCAGC TCGAGGTCGC CGAGCGGTCG
ATGCCCGTCC TGCGGCTCGA CCCGGAACGG CTGCTTGCCG GCCCGGATGA GATCACCGCG
GCGATTTCTT GGGCCGGAGA CCGCATCGCC GCCGGCCCCG TCGTGATCGC CGCAAGCGCT
GCACCCGAAA CCGTGGCCCG GCTGCAATCC CTTTATGGAC GGGAGGCCTC CGGCCAGGCG
ATCGAGACCG CAACCTCGAT CATCGCCGCC GAACTGGTGG CAAGAGGCGT GCAGCGGCTC
GTGGTCGCAG GCGGCGAAAC GTCGGGCGCA GCAGTTGACA GGCTCGCCAT TCCGGCATTT
CTGATCGGAC CGGAGATTGC GGCCGGCGTG CCGGTGCTGC GCACGGTCGG CAATGCCCAG
GGCGATATGC TTCTCGCTTT GAAATCAGGC AACTTCGGAG GCGAGGATTT CTTTGCGGCG
GCGCTGGCGA TGATGCACTG A
|
|---|
| Protein sequence | MAILLGSIAD DYTGASDLAN TLTKNGLRTV QTVGIPDPSL ALPDVDAVVV SLKIRSVPAS
DAVTAATSAE RWLRQRGASH VLYKICSTFD STDAGNIGPV TKALSDAAGG GIVLVTPAFP
ETGRTVYLGH LFVGGQPLNE SPLKDHPLNP MHDANLVRVL TRQSHGAVEL IDLTAIAAGP
GVVKARLEAL SAAGVTAAVA DAIFERDLET LGEVALETPV STGASGLGLG LARALVRSGR
ISSGGAAPTD AIRPVGGLSA IVAGSCSKAT LRQLEVAERS MPVLRLDPER LLAGPDEITA
AISWAGDRIA AGPVVIAASA APETVARLQS LYGREASGQA IETATSIIAA ELVARGVQRL
VVAGGETSGA AVDRLAIPAF LIGPEIAAGV PVLRTVGNAQ GDMLLALKSG NFGGEDFFAA
ALAMMH
|
|---|
| |