Gene Rleg2_5305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5305 
Symbol 
ID6978399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp935066 
End bp935779 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content60% 
IMG OID643394409 
ProductHAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) 
Protein accessionYP_002279227 
Protein GI209547309 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.732123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAGA GCCTTCCGGA ATTCAAATAT ATGACATTCG ATGTCGTCGG TACGCTCATC 
GACTTCGAGA GCGGCCTCAA GACCTGCTTT GCCGAGATCG CCGCCGAGGC GGAAGTCGCC
GTCGACGGCG AGCAGGCGTT GACCCTCTAC CGCGCAGCCC GCTATGCCGA GGATGCCGAT
CTCTTTCCCG ACGATCTTGT GCGCGTCTAC CTCGCGATCG CGCCGAAGCT CGGCCTGCCC
GCCGATCAAA AATATGGCGA GCGGCTGCGG GACTCGGCGA AGAACTGGAA GGGTTTTGCA
GACAGCGCCG CAGCGCTGGC CAGACTTGCG AAGGATTACC GCCTTGTTGC GATGACCAAT
GCCCGCCGCT GGGCATTCGA TTTGTTCGAG AAGGAACTCG GCAATCCCTT CTACGCCACC
TTCACGGCCG ACGATACCGG CACCGAAAAG CCCGATCCCG TATTCTTCGA GACGGTCTTT
GCCTACGTTG CCGCGCAAGG CCATTCGAAG GACGACATCC TGCATGTCGC CCAGAGCCAG
TACCACGATA TCGGGATTTC CAGGAAACTC GGGCTGGCCA ATTGCTGGAT CGAGCGGCGA
CATGCCCAGA AGGGTTACGG CGGCACGATC GAGCCGGTCG AGTTCACCAA ACCCGATTAC
CATTTCACGT CCATGGCAGG CCTTACGGAT GCCGTGGCTG CTGCACGCGC CTGA
 
Protein sequence
MSKSLPEFKY MTFDVVGTLI DFESGLKTCF AEIAAEAEVA VDGEQALTLY RAARYAEDAD 
LFPDDLVRVY LAIAPKLGLP ADQKYGERLR DSAKNWKGFA DSAAALARLA KDYRLVAMTN
ARRWAFDLFE KELGNPFYAT FTADDTGTEK PDPVFFETVF AYVAAQGHSK DDILHVAQSQ
YHDIGISRKL GLANCWIERR HAQKGYGGTI EPVEFTKPDY HFTSMAGLTD AVAAARA