| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5126 |
|---|
| Symbol | |
|---|
| ID | 6978220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | - |
|---|
| Start bp | 764705 |
|---|
| End bp | 765835 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643394257 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_002279075 |
|---|
| Protein GI | 209547157 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.764351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTG GCATCGACAA TGTTAAACTT CCGGAATCCA GGAAGCGCGG CCCACTCGGC
AGCCTCGACC TCGTCAAGGA ACTGGGACTT TCAGGCATCT TCTTCTCCAC GGCGCTGGAC
ATGAGCCCGA CCCTCGACAT CGGTGAACTT CGTGAGATCA GGGCGAAGGC TGACGAGCTT
GGACTTTACC TGGAAAGCGG TGTGGGCAAG ATCAATCCCT ATTGCAGTGC CGAGGAACCG
GCCCTTCGGG CCGCTGGCGA TGGCGACATA ATCGCCGGCT TCACCCGCAT GATCGAGGCA
AGTGCCGCCA TCGGGTGTTT CGAGCTTTGG GTCGCGCCCG GCAACTTCAA GTCCGAATAT
CGCGGCCGGC TGGCCAATGA CCGCTTCCGC ACCGACATCA CCTGGGAAGA CCAGTTGATC
GGCATCGACA AGGTGCTGCG GAAGCTTGCG CCCGTCGCCC GCGCGCATGG CGCGCACCTA
AACATCGAGA CCCATGACGA GATCACCTCC TTCGAGATCC TGCGGCTGAT CGAGAAGGTC
GGGCCGGACT GCGTCGGCGC CGTCTTCGAC ACCGCCAATG GTCTGCAGCG CGCTGAGCAT
CCAGTGTTTG CGGCCAAGCG CCTCGCTCCC TTCATCCGCC AGACGCATAT CAAGGACGCC
TATGTCGGAC GCGCGCCCGG CGGCCTCGAT TTCCAGACCC GTCCTGTTGG CGGCGGCATC
GTCGATTTCG AGACGATCCT GCCGATCCTC GCCGAAGCCT ACCCTGTGCT GAACCTCTCG
TTGGAGGTCG CAGCCTCCGT CGCCGACAAG CCGCGGAAGG CCAATCCACG CCAGTGCATC
GAGATCGATG ATCCGAACTG GCGCGCCGGT CATCCCGATC TCAACGCGGA GGAGCTTGAC
GCCTATATGG CGCTCGTGGA CGCCTACGAA ACACGTGTGA CATCCGGCGA AGTTCCGGAC
TGGGAGGCCT ACGAGGCCAG CCAGTATGGC TATCCCACCT ACGAGCACCA GTCCTACGGC
TTCAGCGAGG CAATCACCTT CATCAAGCGA TCGGCGACTC ACATCGAAGC TATCTGCAAG
GACAAGGGCA TCCCTCTTAA CTCACCAGCT GCGAGCAAGA AGGCGGCCTG A
|
|---|
| Protein sequence | MKLGIDNVKL PESRKRGPLG SLDLVKELGL SGIFFSTALD MSPTLDIGEL REIRAKADEL
GLYLESGVGK INPYCSAEEP ALRAAGDGDI IAGFTRMIEA SAAIGCFELW VAPGNFKSEY
RGRLANDRFR TDITWEDQLI GIDKVLRKLA PVARAHGAHL NIETHDEITS FEILRLIEKV
GPDCVGAVFD TANGLQRAEH PVFAAKRLAP FIRQTHIKDA YVGRAPGGLD FQTRPVGGGI
VDFETILPIL AEAYPVLNLS LEVAASVADK PRKANPRQCI EIDDPNWRAG HPDLNAEELD
AYMALVDAYE TRVTSGEVPD WEAYEASQYG YPTYEHQSYG FSEAITFIKR SATHIEAICK
DKGIPLNSPA ASKKAA
|
|---|
| |