Gene Rleg2_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4890 
Symbol 
ID6977984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp528258 
End bp529562 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content64% 
IMG OID643394047 
Productputative branched-chain amino acid ABC transporter, substrate-binding protein 
Protein accessionYP_002278865 
Protein GI209546947 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.669186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAA AATTCAACGC GGCATCGCTC ACCCGCCGCT CTTTCATCGC ATCGGCTGCG 
GCAGGCAGCG CAGCTCTGGC GCTTTCCGGC CGCACGGCCT TTGCCGAGAG CGGCGACACT
TTGAAGGTCG GCTTCATCAG CCCGCGCACC GGCCCTCTCG GCGGCTTCGG CGAGACGGAT
GGCTATGTGC TCGATCTGGC GCGCAAGGCG CTGGCGAATG GCCTGCAGGC CGGCGGCAAG
ACCTGGAAGG TTGATATTCT CGACCAGGAC ACCCAGTCCG ACCCGTCGCG CGCCGGCCAG
TTGGCGAAGG ACCTGATCAA CAATCAGGCG ATCGACCTGA TGCTCGCCGT CTCGACGCCG
GAAACCATCA ATCCGGTGGC CGACGCCTGC GAGGCAGCCG GAATTCCGTG CCTGTCGACG
GTCATGCCCT GGGAAGCCTG GTATTTCGGG CGCGGCGCCA AGCCGGGCGC GCCCTCGCCG
TTCAAATGGA CCTATCATTT CGGCTTCGGC GTCGAAGAAT TCCACAAGGC CTATGTTTCG
CAGTGGAACC TGATCGAGAC CAACAAGAAG GTCGGCGTCA TGTATCCGAA CGACGCCGAC
GGCAATGCGA TCCGCGCCCA TCTGGCGCCG GCCCTTGCCA AGGCGGGCTT CACCATCGTC
GATCCCGGCG CCTATGAAAC CGGAACCACC GATTTTACGG CGCAGATCGC CCTCTTCCGC
CAGGAAGGCG TGGAAATCTT CAACTCCTTC CCGATACCGC CCGACTTCGC CGCCTTCTGG
CGCCAGGCGG CACAGCAGGG TTTGACCCAG CAGATCAAGA TCTGCCAGGT TGCCAAGACG
GGCCTCTTTC CCTCCGATAT CGAGGCGCTC GGTGATCTCG GCATGAACAT CGGCAGCGCC
GCCTACTGGC ACAAGGCCTT CCCCTATAAA TCGACGCTGA CCGGCGTCTC GGGAACCGAG
CTTGCCGACG GCTATGAAGC GGCCAGCGGC AAACAGTGGA CGCAGCAGCT CGGCGCCAGC
CTTGCGCTTC TCGATGCCGG CTTCGACGCG CTGAAGGCGA GCACCGACGT CAAGAGCAAG
GAGGCGGTCG CCAAGGCGCT CGCCACGCTG AAGACCACGA CGATCGCCGG CAAGGTCGAC
TTCACCAGCG GCCCGGTCGC CAACGTCTCG CCGGGACCGA TCATCGGCAC GCAATGGGTG
AAGGCGGCCG AGGGCTCGAA ATTCGCGCTC GACTATGTCG TCACTGAAAA CGCCACCGAC
CCCAATGTCC CGGTCGGCGC CAAGCTCATC GCTTACAACG GATAA
 
Protein sequence
MNGKFNAASL TRRSFIASAA AGSAALALSG RTAFAESGDT LKVGFISPRT GPLGGFGETD 
GYVLDLARKA LANGLQAGGK TWKVDILDQD TQSDPSRAGQ LAKDLINNQA IDLMLAVSTP
ETINPVADAC EAAGIPCLST VMPWEAWYFG RGAKPGAPSP FKWTYHFGFG VEEFHKAYVS
QWNLIETNKK VGVMYPNDAD GNAIRAHLAP ALAKAGFTIV DPGAYETGTT DFTAQIALFR
QEGVEIFNSF PIPPDFAAFW RQAAQQGLTQ QIKICQVAKT GLFPSDIEAL GDLGMNIGSA
AYWHKAFPYK STLTGVSGTE LADGYEAASG KQWTQQLGAS LALLDAGFDA LKASTDVKSK
EAVAKALATL KTTTIAGKVD FTSGPVANVS PGPIIGTQWV KAAEGSKFAL DYVVTENATD
PNVPVGAKLI AYNG