| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4651 |
|---|
| Symbol | tpiA |
|---|
| ID | 6977745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 287488 |
|---|
| End bp | 288252 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643393825 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_002278643 |
|---|
| Protein GI | 209546725 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.743996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.314154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGTCT GGGTCGGCAC CAGCTTCAAG ATGAACAAGA CGGTGGAGGA AGCGCTGGCT
TTCGCGCACC GCCTCGCAGC GACGGATGCG GAACGCGATA CCCGCGTGCA GCGCTTCGTC
ATTCCGGCTT TTACCGCGGT GCGCGAGGTC AAGCGTCTGC TGGCCGAGAC TTCGGTGAAG
GTCGGCGCCC AGAACATGCA CTGGGAGGAT GCCGGCGCCT GGACCGGCGA GATTTCTCCT
CTGATGCTGA AGGACTGCCA GCTCGACATC GTCGAGCTCG GCCATTCCGA GCGGCGCGAG
CATTTCGGCG AGACCGACGA AACCGTCGGC CTCAAGGTTT CCGCCGCCAT CCGCCATGGC
TTGACGCCGC TGATCTGCAT CGGCGAGACC TTGCATGAGC GCGAGGAGGG CCGGGCCGAT
GCTGTTTTGC GGCGCCAGGT CGAGGCGGCT CTGCGCGGCG TCGAAACCGA GGCCGACAAG
GCTCCGATCC TGCTTGCCTA TGAGCCTGTC TGGGCGATCG GCGCCAAGGG AATACCGGCG
ACCGCCGACT ACGCGTCGGA GCGGCACGGC AAGATCGCCG AGGTGGTGAA ATCCATTCTT
GGCCGTGCGG TGCCGGTTCT CTACGGCGGC AGCGTCAATC CGGAAAATTG TCAGGAACTG
ATCACCGAGG CGCATATCGA CGGCCTGTTC ATCGGCCGCT CCGCCTGGGG CGTCGACGGT
TACCTCGACA TTCTTCGCCG CGTCAGCGCG GCGATCGAAA GGTGA
|
|---|
| Protein sequence | MVVWVGTSFK MNKTVEEALA FAHRLAATDA ERDTRVQRFV IPAFTAVREV KRLLAETSVK
VGAQNMHWED AGAWTGEISP LMLKDCQLDI VELGHSERRE HFGETDETVG LKVSAAIRHG
LTPLICIGET LHEREEGRAD AVLRRQVEAA LRGVETEADK APILLAYEPV WAIGAKGIPA
TADYASERHG KIAEVVKSIL GRAVPVLYGG SVNPENCQEL ITEAHIDGLF IGRSAWGVDG
YLDILRRVSA AIER
|
|---|
| |