| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3566 |
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| Symbol | |
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| ID | 6973372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011367 |
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| Strand | - |
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| Start bp | 13228 |
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| End bp | 14619 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643393535 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_002278353 |
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| Protein GI | 209542172 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGACTG ACTCCTTTGA CTATGCCGAT TTGCCTCCGG CGTTGCTTGA GTTTCATTCG
CCGACTGCCG CGCTTGTCAA CATGCCGGCC ACGCCTTCAG CCCGCTATAT ATCTTGGATA
ATTGGTGCGC TGACCGCGAG TAGTATCGTA TTCATGATGG TCTTTCCGCT GACTCGGGTG
GTGTCCACCG AAGGGAAAAT AGTATCTATT CAGAGACCTC TCGTTGTACA GCCGTTCGAA
ACGTCGATTA TTCGTAGTGT GGACGTGCGG GAAGGTGACC TTGTTCATAA GGGCCAAGTA
TTATCCCGCC TTGACCCTAC GGTTAACGAC GCTGATATCG CAAATTTGAA GTCACAAACC
CAAAGTTATA CTGCGGAAGT CGCACGCCTT TCTGCGGAAG CGCAGGGTAG GGACTACCTG
TCGGACCCCG ACGACCCAGC GTCAATACAG CAAGCGGCGA CATTCCTGCG TCGTAAGGCT
GAGTTTGCGG CCAAAATCGA GAACTATCAA GAACAACTGG CTTCCCAGGC GGCCGATCTC
CAAGGCGCGC TGGCCAACGC TACCATCTAC GCTAAACGGC TCGAAGTCGC GACCAACGTA
CACAGGATGC GAACTCGCTT GCAGGAGGAA CAGGTGGGCA GCCGCCTTTC TACTCTTGGC
GCTCAGAACG ATATGATGGA AGTTCAGCGC TCCGAGGTCC TTGCCCAGCA TGACGCAGCA
TCGGCAAAAG CCAAGTTGCA GGCGCTCGTC GCCGAACGCC AAGAATATAT TGAAACATGG
AGAGCGGACA TCTATCGCGA TTTAAGCGAG GCACAACACA AGCTCTCAAC CACGGATGCC
GACTATCAAA AGGCGAAGCT CCGCAAAAGC ATGACCATCT TGACGGCGCA AGAGGATGCA
GTCGTCCTGA CGATCGCCAG ATTGTCACCT GGGTCCGTTC TGACAACCGG GGCAGAGCTG
ATGCGGCTTG TTCCAGTCGA TAGCGGTCTT GAAGTCGAGG TGCATTTAAG CAGCAAAGAT
GCGGGTTTTG TGCAACCCGG CAACAAGGCA ATTATCAAGT TCGCGGCATT TCCATACTCT
CAGTATGGCG GTGCTGAGGC GCTGGTACGA GAAATCAGCG CAGACACGTT CGATGGTAAT
ACGTCACAGG ACGCCGTATC AAACGGCGGG ATCGGGCAGC GAGCGAGCAA CGATCCTGCC
GCTGCGGCAC AGTCCTATTA TCGCGCACGG CTGCATATCG AAGATTATCG GTTGCACGGC
GTACCTTCAT CGTTTCACCC CCGGCCAGGA ATGCCCATTA CAGCAGATAT TCAAGTGGGT
ACACGAACCA TTATGCAATT TCTTCTTAAC AATCTCATTC CGCTCATGAC TGACGGTATG
AGGGAGCCAT GA
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| Protein sequence | METDSFDYAD LPPALLEFHS PTAALVNMPA TPSARYISWI IGALTASSIV FMMVFPLTRV
VSTEGKIVSI QRPLVVQPFE TSIIRSVDVR EGDLVHKGQV LSRLDPTVND ADIANLKSQT
QSYTAEVARL SAEAQGRDYL SDPDDPASIQ QAATFLRRKA EFAAKIENYQ EQLASQAADL
QGALANATIY AKRLEVATNV HRMRTRLQEE QVGSRLSTLG AQNDMMEVQR SEVLAQHDAA
SAKAKLQALV AERQEYIETW RADIYRDLSE AQHKLSTTDA DYQKAKLRKS MTILTAQEDA
VVLTIARLSP GSVLTTGAEL MRLVPVDSGL EVEVHLSSKD AGFVQPGNKA IIKFAAFPYS
QYGGAEALVR EISADTFDGN TSQDAVSNGG IGQRASNDPA AAAQSYYRAR LHIEDYRLHG
VPSSFHPRPG MPITADIQVG TRTIMQFLLN NLIPLMTDGM REP
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