Gene Gdia_3552 details

Gene Information

• Locus tag: Gdia_3552
• ID: 6973388
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gluconacetobacter diazotrophicus PAl 5
• Kingdom: Bacteria
• Replicon accession: NC_011367
• Strand: +
• Start bp: 942
• End bp: 1613
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643393522
• Product: initiator RepB protein
• Protein accession: YP_002278340
• Protein GI: 209542159
• COG category: [L] Replication, recombination and repair
• COG ID: [COG5527] Protein involved in initiation of plasmid replication

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.132106
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATTTCG GGTTCAATGA ACCTATTGTT TCCTATGCCG GAGGTAATGA AAGAATAGAA 
GCATCGTTGC TTCGTCTAAT GGGGACTATT GCGATCGTCA CCATTCGAAA AGACGGAAAA 
AGCTATAAAA GACGGGTTCA ACTTCTTGGT CCAAGCGATG AAAGCTTGGA AAAAGATGGC 
TTCCTTCACT ACCGCATACC GGAGGAACTA ATAGAAATAC TTCAAAATAG CGAAGTCTAT 
GCACGCCTCA AAACACAAGT GATGTATTGC TTCGAGTCGA AATATACGCT CTGCCTGTAT 
GAGATGACGG AGCGCCGCAT TGGTCTTGAA TATAAGCAGA CAGAAGAATT TACGATAGAA 
GAGTTGCGTG GACTTCTAAA TGTCCCAGAC GGAAAACTTG AACGGTTTGC TGACCTCAAT 
AAATATTGTC TCAAAGTCGC CACCGAAGAA ATAAACAAAT TGTGCCCATT CTATGTTGAT 
TTTTCTCCTA TAAAGAAAGG ACGAAAAGTC GAACGGATCG CTTTCCATTG GTTTCCCAAG 
ACCTCAAGTG GAAAGCGCGA TGCTCAAATT TTAATCGATC AACATCGTAT TGTCCGTCGA 
GCGAAATTGC GTGGTCTAGC TGCCGAACTG CCGCTTCTGT TAGATTTCGG CACTGAACCG 
CCAGAAAAGT GA 

 

Protein sequence

MNFGFNEPIV SYAGGNERIE ASLLRLMGTI AIVTIRKDGK SYKRRVQLLG PSDESLEKDG 
FLHYRIPEEL IEILQNSEVY ARLKTQVMYC FESKYTLCLY EMTERRIGLE YKQTEEFTIE 
ELRGLLNVPD GKLERFADLN KYCLKVATEE INKLCPFYVD FSPIKKGRKV ERIAFHWFPK 
TSSGKRDAQI LIDQHRIVRR AKLRGLAAEL PLLLDFGTEP PEK