Gene Rleg2_6012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6012 
Symbol 
ID6977398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp440656 
End bp441423 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID643393464 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_002278282 
Protein GI209546392 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.784619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0731526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA TTGATCCGAT CCTCGATGCC GATCTCGACG CCTATGTGGA TGGCGAACTC 
GATGTCGCCC GCCGCATCCA GGTGGAATCC TATCTCTCCG ACCATCCGGC GATTGCCGCC
AAGGTCATGG CCGACCTCAG CGTCAAGGGC GAGCTGCGCC TGGCGCTGGC CGGCGAAAGC
GCCTTCGGCC GCCCGGAGAC CCGCGATGCG GCCCGCCGGC TGGAACGTGG CCTTTCCTAT
GGCCGCATCT TCCATTCCAT GCAGCGCATT GCCGCCGTCG GCATTCTGGT AACTGGCGGC
TGGGTGGCGC ATAATTCCTT CGGTGCTTTC TCGGCAACCG AGGTATCGGC ATCGGTGCCG
GCACCCGCCT ATGTCGAGGA TGCCGTCCGC GCTTATCAGA CCGCGGCCCT GCGCCAATCG
ATGCCTCCGC AGACGCCGGC CACCTACAGC GCTGACGATA TCCGCGCCGC TACCGCCATC
GTGATGCCGG ACCTGCCGAA GGACTGGAAG GTCGCCGACG TGCAGATCTT CCCATCCGAA
TTCGGCCCGA GCGTCGAGAT GGCGATCGAG CAATCGGATG GAAAGCGGCT ATCGCTTTTC
GCCGTCCGCC CGGGCGCCTT CGAGGTCAAG CCGGTCAGCC ATCTCGCACT TGAGAAGGCC
GAAGCCGCCT ATTGGCAGAT CGGCGAGGTC GCCTATGCGC TGATCGCCGA CGAAAGCGGT
CTCAATCTCG ATCAGGCGGC CGAACGGCTC GCCCGTTCCC TCTATTAG
 
Protein sequence
MKAIDPILDA DLDAYVDGEL DVARRIQVES YLSDHPAIAA KVMADLSVKG ELRLALAGES 
AFGRPETRDA ARRLERGLSY GRIFHSMQRI AAVGILVTGG WVAHNSFGAF SATEVSASVP
APAYVEDAVR AYQTAALRQS MPPQTPATYS ADDIRAATAI VMPDLPKDWK VADVQIFPSE
FGPSVEMAIE QSDGKRLSLF AVRPGAFEVK PVSHLALEKA EAAYWQIGEV AYALIADESG
LNLDQAAERL ARSLY