Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5875 |
Symbol | |
ID | 6977264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011366 |
Strand | - |
Start bp | 281957 |
End bp | 282850 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643393330 |
Product | DNA polymerase LigD, polymerase domain protein |
Protein accession | YP_002278148 |
Protein GI | 209546258 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
TIGRFAM ID | [TIGR02776] DNA ligase D [TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCC AAAATCCACC GGCAAGTCAT CCACCCGCAT CGGACGTCGT GCTGACCCAT CCTGACCGGC TCTACTGGCC GGACGAGGGC GTGAGCAAGC AGGCGCTTAC GGATTATTAC GCGGCGGTCT GGCCGTTCAT GGCGCCTTAT CTCGTCAATC GGCCCCTGGC GCTGCTGCGT TTGCCGGATG GGATCAAGGG TCACCAGCGG TTTTTCCAGA AACATGCGTG GAAGGGCATG AATCCTCATA TCGAGGAGGT CGCCGATCCT GAGGAAACGG ACGGCGAAAA GCTGCTGCGG ATTGTCGATT TCAACGGTCT GACGGCGCTG GTGCAATCGG CCGTGCTTGA AATTCATCCC TGGGGCACGA CGACCGAGAA TTGGGAAAGA CCGGATATGA TCACCATGGA CCTCGATCCC GGCGAGGACG TGGCCTGGAG CGCGGTGATT TCGGCCGCCC TTGACGTGAA GGCGCGGCTG GAAGCCCGCG GACTTGCCGC CTTCGTCAAG ACCTCGGGCG GCAAGGGGCT GCATGTGGTG GCGCCGCTTG CGCCGAAGGC CGGCTGGGCC GCGGTGAAGG ATTTCGCCCA TTCCCTCGCC GAAAGCATGT CGGCCGACGC CCCGGAAAAG TATCTTTCCA CTGCGACGAA GGCCAAACGC GGCGGCCATA TCTATATCGA TTATCTCCGC AACGGCCGCG GCAATACGGC GGTTGCCGCC TATTCGACAC GGGCACGGCC GGGGGCGCCG GTTTCGATGC CGATCGATTG GTCTGAATTA AACGAGATCA GTGGCCCGGC CGCCTTCACG CTCGCCAATG TGCCGCAGCG ATTGGAAACC CGTCCGAGCG ACCCATGGCG CGATTTCTTC GATGCGGCTG CACCGCTGGA ATGA
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Protein sequence | MSPQNPPASH PPASDVVLTH PDRLYWPDEG VSKQALTDYY AAVWPFMAPY LVNRPLALLR LPDGIKGHQR FFQKHAWKGM NPHIEEVADP EETDGEKLLR IVDFNGLTAL VQSAVLEIHP WGTTTENWER PDMITMDLDP GEDVAWSAVI SAALDVKARL EARGLAAFVK TSGGKGLHVV APLAPKAGWA AVKDFAHSLA ESMSADAPEK YLSTATKAKR GGHIYIDYLR NGRGNTAVAA YSTRARPGAP VSMPIDWSEL NEISGPAAFT LANVPQRLET RPSDPWRDFF DAAAPLE
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