| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5807 |
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| Symbol | |
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| ID | 6977196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011366 |
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| Strand | - |
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| Start bp | 216681 |
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| End bp | 218777 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643393262 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002278080 |
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| Protein GI | 209546190 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.402593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0411689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGA ACGTCCGGCT TCTGGATAAC CGGTGGGATG ATGCATATGC GGCAGGCCTC
GATGAGCCCG GCAAGCTGCT CTATCGCTCC AACCTGCTCG GCGCCGACAA GCGCATCACC
AATTACGGCG GCGGCAACAC CTCGGCGAAG GTGATGGAAA CCGATCCGCT GGATGGCGGC
ACGGTCAAGG TGCTCTGGGT CAAGGGCTCC GGCGGCGATG TCGGCACGAT CAAGCTCGAC
GGCTTCGCCA CCCTCTACCA GGACAAGCTC GAAGCGCTGA AGGGCATCTA TAAGGGTGTC
GAAGACGAGG ATCGCATGGT CGGCTTCCTG CCGCACTGCA CCTTCAACCT CAACGCTCGC
GCCGCCTCGA TCGACACGCC GCTGCACGGC TTCGTGCCGT TCACCCATGT CGATCACATG
CATCCCGACG CGATCATCGC GATCGCCGCC TCGAAGAATT CGCGGGAGCT GACGCAGCAG
ATCTTCGGCG CCGAGATTGG CTGGCTGCCC TGGCGCCGTC CGGGCTTCCA GCTCGGCCTC
GATCTCGAAG CCTTCGTCAA GGCGAACCCG AATGCCAAGG GCGTCGTGCT CGAAAGCCAT
GGCCTCTTTA CCTGGGCTGA TGATGCCAAG GCCTGCTACG AGCTGACGCT CGATATCATC
AACAAGGCGA TCGTCTGGTT TGCCGAAAAG ACTGAAGGCA AGACGATTTT CGGCGGCGCC
GTTACGGAGA GCCTGCCCGT TGCCGAGCGC CGCGCCATTG CTGCCCGGCT GATGCCGGAG
ATTCGCGGCC GCATCGGCAA GCAGGAACGC AAGCTCGGTC ATTTCGACGA TCAGGACGCC
GTGCTCGAAT TCGTCAATTC GAAGGATTTG CGCCCGCTCG GCGCGCTCGG CACCAGCTGC
CCCGATCATT TCCTGCGCAC CAAGATCCGC CCGCTGATCG TCGATTTCGA TCCCGCCAAG
CCGGATGTCG ACGCGATCGT TGCCGGCCTC GACCAGGCGC TGGAGGATTA TCGCGCCGAT
TACGCCCGCT ATTACAACGA CTGCAAGCAT GACAATTCGC CCGCCATGCG CGACGCCAAT
CCCGTCATCT TCCTCGTTCC CGGCGTCGGC ATGCTGTCCT TCGCCCGCGA CAAGGCGACG
GCCCGCATCG CCAGCGAATT CTATGTCAAC GCCATCAACG TCATGCGCGG CGCTTCGACG
GTTTCGGAAT ATCAGGGCCT GCCGGAGCAG GAAGCCTTCG ATATCGAATA TTGGCTGCTC
GAAGAGGCTA AGCTGCAGCG CATGCCGAAG CCGAAGAGCC TTGCCGGCCG CGTGGCCTTC
GTCACCGGCG GCGCCGGCGG CATCGGCCGG GCGACGGCTG CGCGCCTCGT CGGCGAGGGC
GCCTGCGTGG TGCTTGCCGA TATCGACCAG GCGGCGCTTG AGGGCACCGA GGCCGATTTC
GTCAAGAAGT TTGGCGCCGA TGCGGTGCGC AGCGTCCGGC TCGACGTCAC CAAGGAAGTT
GCGGTGGTCG CCTCCTTCGC GGAAGCCTCG GTCGAATTCG GCGGCATCGA TATCCTCGTC
TCGAATGCTG GCATTGCCTC CTCCGCGCCG ATCGAAGCCA CCGAGCTTGC GACGTGGAAC
CGCAATATCG ATATTCTGGC GACCGGCTAT TTCCTCGTTT CGCGCGAAGC CTTCCGTCTG
TTCCGCCGCC AGGCGCTCGG CGGCAACATC GTCTTCGTCG CCTCGAAAAA CGGTCTCGCG
GCTTCGCCGA ATGCCGCTGC TTATTGCACG GCAAAGGCCG CCGAAATCCA TCTCGCCCGC
TGCCTGGCGC TGGAAGGTGC CGATGCCGGC ATCCGCGTCA ATACCGTCAA CCCGGATGCG
GTGCTACGCG GTTCGAAGAT CTGGAGCGGC GAATGGCGCG AGCAGCGCGC CGCCTCGTCG
AAGATCGAAG TGGATGATCT CGAGGAACAT TACCGCAAGC GTTCGATGCT GAAGCTCAAC
GTGTTTCCGG AAGATATCGC CGAGGCGATC TATTTCCTCG CATCGGACCT TTCGGCAAAA
TCGACCGGCA ACATCATCAA CGTCGATGCC GGCAACGTGC AGAGCTTTAC GCGTTGA
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| Protein sequence | MAANVRLLDN RWDDAYAAGL DEPGKLLYRS NLLGADKRIT NYGGGNTSAK VMETDPLDGG
TVKVLWVKGS GGDVGTIKLD GFATLYQDKL EALKGIYKGV EDEDRMVGFL PHCTFNLNAR
AASIDTPLHG FVPFTHVDHM HPDAIIAIAA SKNSRELTQQ IFGAEIGWLP WRRPGFQLGL
DLEAFVKANP NAKGVVLESH GLFTWADDAK ACYELTLDII NKAIVWFAEK TEGKTIFGGA
VTESLPVAER RAIAARLMPE IRGRIGKQER KLGHFDDQDA VLEFVNSKDL RPLGALGTSC
PDHFLRTKIR PLIVDFDPAK PDVDAIVAGL DQALEDYRAD YARYYNDCKH DNSPAMRDAN
PVIFLVPGVG MLSFARDKAT ARIASEFYVN AINVMRGAST VSEYQGLPEQ EAFDIEYWLL
EEAKLQRMPK PKSLAGRVAF VTGGAGGIGR ATAARLVGEG ACVVLADIDQ AALEGTEADF
VKKFGADAVR SVRLDVTKEV AVVASFAEAS VEFGGIDILV SNAGIASSAP IEATELATWN
RNIDILATGY FLVSREAFRL FRRQALGGNI VFVASKNGLA ASPNAAAYCT AKAAEIHLAR
CLALEGADAG IRVNTVNPDA VLRGSKIWSG EWREQRAASS KIEVDDLEEH YRKRSMLKLN
VFPEDIAEAI YFLASDLSAK STGNIINVDA GNVQSFTR
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