Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5664 |
Symbol | |
ID | 6977055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011366 |
Strand | + |
Start bp | 52974 |
End bp | 53720 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643393121 |
Product | GntR domain protein |
Protein accession | YP_002277939 |
Protein GI | 209546049 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0098751 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACA GAGACAACGC GGTCTTCAAC ACTATTCGCC AGCCGCCGAA CCTGCGCAGC GGCCTTGCCG ATACGCTGAT GGCGCAGATC GAGTCCGGCG ATCTGAAGCC CGGCCAGCGC CTGCCGACCG AACAGGCAAT CATGAGGACG ACCGGCGTCA GCCGGACGAT TGTCCGCGAG GCGCTCGCCA CGCTGCGCGC CAAGGGCCTG ATCACCACCC GGCAGGGGCT TGGAGCTTTT GTTTCGAACG ATCCCAACCC GCGATCCTTC TCGATCATTC CCAACGACCT GCAGTCGATC GACGAGATCC TGCGCGTGCT GGAACTGCGC ATGGGGGTCG AATACGAAGC CGCCGGTCTT GCCGCGCTGC GGCGCACGCC TGAGGATCTC GACCGCATGC AGGATCGGCT CGATGCGCTC GACAAGGCGC TGGAGGAGGG CGGATACGGG GCGCAGGAGG ACTACGCCTT CCACCGGTCG ATCCTGGTCG CGACGCAGAA CTCCTATTAC GGCCGCCTCT TCGATACGTT CGGCGACCTC ATGGTGCCGC GGCAATGGGC CCGCCTGGAC AAGATGACGG CGGCCGAGCG CAAGCGCCAT GCGGCGCGCA TGCGCCGGGA ACACCATGCC ATATTCGCGG CGATCCGCGA CGGCGAAGAG GCCGCCGCCC GCCGCGCCAT TCGAACTCAC CTGTCGAAGA GTGCCGCCCG CTTCGAAGAA CTGCGCGACG CCAGCACCTC GTCGTGA
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Protein sequence | MTDRDNAVFN TIRQPPNLRS GLADTLMAQI ESGDLKPGQR LPTEQAIMRT TGVSRTIVRE ALATLRAKGL ITTRQGLGAF VSNDPNPRSF SIIPNDLQSI DEILRVLELR MGVEYEAAGL AALRRTPEDL DRMQDRLDAL DKALEEGGYG AQEDYAFHRS ILVATQNSYY GRLFDTFGDL MVPRQWARLD KMTAAERKRH AARMRREHHA IFAAIRDGEE AAARRAIRTH LSKSAARFEE LRDASTSS
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