Gene Gdia_3535 details

Gene Information

• Locus tag: Gdia_3535
• Symbol: nrdR
• ID: 6976987
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gluconacetobacter diazotrophicus PAl 5
• Kingdom: Bacteria
• Replicon accession: NC_011365
• Strand: +
• Start bp: 3868685
• End bp: 3869221
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643393054
• Product: transcriptional regulator NrdR
• Protein accession: YP_002277873
• Protein GI: 209545644
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 51
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGATGCC CTTTTTGTGG TCACGAGGAT ACCCAGGTCA AAGACAGCCG CCCGCACGAG 
GATGGGGCCG CGATCCGTCG CCGCCGGATC TGCGCGGCGT GCAGCCAGCG ATTCACCACG 
ATCGAGCGCG TGCAGTTGCG CGACCTGTAT GTGGTCAAGG CCGACGACCG GCGTGTGCCG 
TTCGAGCGCG ACAAGCTGGC CCGATCGGTG CGCATCGCGT TGCGCAAGCG CCCGGTCGAT 
GAGGAACGGA TCGAACGCAT CGTCAACGGG CTGGTTCGCC AGCTGGAGGC ATCGGGCGAA 
ACCGACATCC CGTCGCGCGA TATCGGCAAG CTGGTGATGG GCACGCTGCG CGAGGTCGAT 
ATCGTGGCCT ATATCCGCTT TGCCAGCGTG CATTGGGATT TCCGGGAAAC CAAGGATTTC 
GCCGCGATTC TGCAATCGAT TCCCGGCACG GCGGACGGTG ACGTGCCGGT CGTTCCCGGC 
GACGCGGCGG CGGCGATCGC AGCAGAGTCT GGACCTGGCG GCGTAAAGAG GCGATGA 

 

Protein sequence

MRCPFCGHED TQVKDSRPHE DGAAIRRRRI CAACSQRFTT IERVQLRDLY VVKADDRRVP 
FERDKLARSV RIALRKRPVD EERIERIVNG LVRQLEASGE TDIPSRDIGK LVMGTLREVD 
IVAYIRFASV HWDFRETKDF AAILQSIPGT ADGDVPVVPG DAAAAIAAES GPGGVKRR