Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3485 |
Symbol | |
ID | 6976937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3816253 |
End bp | 3816741 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643393006 |
Product | peptidase A24A prepilin type IV |
Protein accession | YP_002277825 |
Protein GI | 209545596 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0379424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTGGG TTGTTGATGG CTTAGTCGTT ATTTCCACCA TTTTTCTTGT ATATGCCGCG TTGCATGATG TGGCGGTCCG AACAATACCT GATCAAGTGG TCGTCGCCTT GGGTGGGCTT GGGGCGACGA TCGCCATTCT GCATGGCCAT ATCGTGGGTT CCATTCTGGT CGCGATCTGC GTATTCGGTT TGTGCTTCGC GATCTGGTGG TTCGGGGCGA TCGGGGGCGG CGACGTCAAG CTGCTCAGTG CGGCGTCCTT GTTGTTTCCG CCCGCCGCGG TGCCGTCATG GATTTTGACG ATAGCCATGT CGGGTGGTGT TCTGGCCGGT TTCTACTTGA TGGTACGTCA TCGGGTCACG GTCGGTCCGG TGCGACACGG TTGTTTCGGC CGTATTGTGC GGAGCGAGCG TTGGCGGATG CGTCGCGGCG GTCCTTTGCC TTATGCCGTC GCCATCGCGG CGGGGTCCTG TTTTCAGCTT ATCCGGTGA
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Protein sequence | MGWVVDGLVV ISTIFLVYAA LHDVAVRTIP DQVVVALGGL GATIAILHGH IVGSILVAIC VFGLCFAIWW FGAIGGGDVK LLSAASLLFP PAAVPSWILT IAMSGGVLAG FYLMVRHRVT VGPVRHGCFG RIVRSERWRM RRGGPLPYAV AIAAGSCFQL IR
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