Gene Gdia_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3477 
Symbol 
ID6976929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3807960 
End bp3808703 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content62% 
IMG OID643392998 
Productflagellar basal body rod protein 
Protein accessionYP_002277817 
Protein GI209545588 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.44174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.204682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAACA CGACCTACAT CGCCCTGTCC CGTGTCGACG TGCTGTCGCG CGCGCTCGAA 
GTTACGGCCA ACAACCTGGC CAACGCGAAC ACGGACGGCT TCAAGGCCTC GAAGGAGCTG
TTCTCGGACT ATCTCGTCCA GCAGAAGGAC GTGCATGGGC TGCCGGGCGA CAAGGAAGAG
GTGTACACTC AGGACAGGTC GACCTATCAG GACCGTCTGC AAGGGGCGTT GCGGCAGACG
GGCAACCTGA CGGATTTCGC CATCAATGGC GAGGGCTACT TCGCCGTTCG CACCACGCAG
GGGGTCCGGC TGACCCGCAA TGGTGAATTC AACCGTCGCG CGGACGGGAC GATCGTCGAT
GGTTCGGGAA ACCCGCTGAT CGACAGGAAC GGCAACAACG TGGTCATCCC GCCGCGGGAT
CATACGCTGT CGGTGGCGTC GGACGGAACG ATGTCGACTG AAACCGGACG GGTCGCCACG
CTGGACCTTG TGACCGTCGA CAACCCCAAT ACCCTGGTGC CGGAGGGCGG CTACCTCCTG
CGGCCGACGA CGCCGACCCG GAACGTGGCC AACAAGGAAA TACGGCAGGG GATGCTGGAG
TCGAGCAACG TGAACGCCGT TTCCGAAACG ACGCAGATGG TCGAGATCCA GCGCGATTAC
GACCTGACCT TCCAGTTGAT CCAGACGGAA TCCACCCGCC AGTCCAACGC GATAGACAAG
ATCACCGCCG ACCCGACCAC ATAG
 
Protein sequence
MENTTYIALS RVDVLSRALE VTANNLANAN TDGFKASKEL FSDYLVQQKD VHGLPGDKEE 
VYTQDRSTYQ DRLQGALRQT GNLTDFAING EGYFAVRTTQ GVRLTRNGEF NRRADGTIVD
GSGNPLIDRN GNNVVIPPRD HTLSVASDGT MSTETGRVAT LDLVTVDNPN TLVPEGGYLL
RPTTPTRNVA NKEIRQGMLE SSNVNAVSET TQMVEIQRDY DLTFQLIQTE STRQSNAIDK
ITADPTT