| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3312 |
|---|
| Symbol | |
|---|
| ID | 6976752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3622255 |
|---|
| End bp | 3623502 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643392823 |
|---|
| Product | cysteine desulfurase, SufS subfamily |
|---|
| Protein accession | YP_002277654 |
|---|
| Protein GI | 209545425 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.0757647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCT CGCCCGCCGT CATGCCCGAC CCGATCGACG CCCTGCGCGC CCGCCGCGAC
GATTTCCCGA TCCTGAACGA GAGGGTGCAC GGCAAGCCGC TGGTCTTCCT GGACAGCGCG
GCCTCGGCCC AGAAGCCGCT TCCGGTCATC GAGGCGATGG CGGAGACGAT GCGTACCCAG
TACGCCAACA TCCATCGCGG CCTGCACTGG ATGAGCGAGC GGACCACCGA CGCGTACGAG
GGCGTGCGCG ACCAGGTCGC CGGCCTGATC GGTGCGGCGC GCGAGGAAAT CATCTTCACG
CGCAACAGCA CCGAGGCGAT CAACCTGGTC GCCCATTCCT TCGGCAGCCT GATGCGTCCG
GGCCAGGCGG TCGTGATCTC GGAAATGGAG CATCACGCCA ACCTGGTGCC CTGGCAGATG
CTGCGCGACC GCGCGGGCAT CGAACTGCGC GTGGCGCCGA TCAGCGATTC CGGCGACCTG
GAACTGGATG CCCTGGCGCG GCTGCTGGAT GACGGCAAGG TGGCGCTGGT GGCCGTCACC
CACATGTCCA ACGTGCTGGG CACCATCACC CCGGCGCGCA AGATCGCGGA CATCGCGCAT
GCCGCCGGTG CGCGGGTGCT GTTCGACGGC AGCCAGATGG TGGTCCATCA CCGGGTGGAC
GTGCGGGCGA TCGACGCCGA TTTCTACACC TTCACCGGGC ACAAGCTGTA CGGCCCCACG
GGCATCGGCG TGCTGTGGGG GCGGCGCGAA CTGCTGGAGG AAATGCCGCC CTTCCTGGGC
GGGGGCGACA TGATTTCCTC CGTCCGGTTC GAGGGATCGA GCTGGGCGAC CGTGCCCCAC
AAGTTCGAGG CCGGCACGCC CGCCATTATC GAGACCATCG GGCTGGGGGC CGCCATCTCC
TACGTCGAAT CGGTGGGATA TGACGCCATC GCGGCGCATG AATCCGCGCT GCTGGACCAT
GCGCTGCGGC GGCTGGGCGA GGTGCCCGGC CTGCACGTGG TGGGGTCGCC GGTCGAACGC
GGCGGCGTGA TCTCGTTCAC CATGGACGAC GTGCATCCGC ATGACATCGC CACCCTGCTG
GACCGGAACG GCATCGCGAT CCGGGCCGGC CATCATTGCG CGGAACCGCT GATGCGGCGC
CTGGGGCTGT CCGCCACCGC GCGGGCCAGC TTCGGCCTCT ATACGACGCG CGAGGAGGTG
GACGCTCTGG CCAGGACGCT GGAGCAGATC CGCTCCTTCT TCCTGTAA
|
|---|
| Protein sequence | MDVSPAVMPD PIDALRARRD DFPILNERVH GKPLVFLDSA ASAQKPLPVI EAMAETMRTQ
YANIHRGLHW MSERTTDAYE GVRDQVAGLI GAAREEIIFT RNSTEAINLV AHSFGSLMRP
GQAVVISEME HHANLVPWQM LRDRAGIELR VAPISDSGDL ELDALARLLD DGKVALVAVT
HMSNVLGTIT PARKIADIAH AAGARVLFDG SQMVVHHRVD VRAIDADFYT FTGHKLYGPT
GIGVLWGRRE LLEEMPPFLG GGDMISSVRF EGSSWATVPH KFEAGTPAII ETIGLGAAIS
YVESVGYDAI AAHESALLDH ALRRLGEVPG LHVVGSPVER GGVISFTMDD VHPHDIATLL
DRNGIAIRAG HHCAEPLMRR LGLSATARAS FGLYTTREEV DALARTLEQI RSFFL
|
|---|
| |