Gene Gdia_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3109 
Symbol 
ID6976543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3405512 
End bp3406258 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content71% 
IMG OID643392617 
ProductCarboxymethylenebutenolidase 
Protein accessionYP_002277454 
Protein GI209545225 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCC ACGGGGACGA AACCGCCGAT ATCGCGACCG CCAGCGGCCC GATGCGGCTG 
CATGTGCTGC GTCCGGCGGC GGACGGGGCC TTTCCCGGCG TGGTGCTGTT CTCCGAGATC
TACCAGGTGA CGGCCCCGAT CCGCCGGCTG GCCGCCATGG TCGCGGGGCT GGGCCACGTG
GTGGCGGTGC CGGAGGTCTA TCACGAATAC GAACCCGCGG GCACCGTGCT GGCCTACGAC
AAGCCGGGCA CCGACCGGGG CAACGAACTG AAATACGCCA AGCCCCTGGC GTCGTACGAC
GACGATGCCC GGGCGGCGGT GGCGTGGCTG GCGGCGCATC CGGCCTGCAC CGGGCGGATC
GGCACCATGG GGGTCTGCCT GGGCGGGCAC CTGGCCTTTC GGGCGGCGAT GAACCCGGCG
GTGTCGGCGG CGGCGTGCTT CTATGCCACC GACATCCATT CGGCGTCCCT GGGGCAGGGA
CGGCACGACG ACACGCTGCA GCGGCTGGGC GAGATTCCGG GCGAGGTGAT GATGACCTGG
GGCCGGCAGG ACCCGCATGT CCCCTTCGCC GGGCGGCAGA TGATCCGCGA GGCGCTGGAG
GCTGCGGGCG TCCGCTACGA ATGGCACGAA CTCAACGCCC AGCATGCGTT CCTGCGGGAC
GAGGGGCCGC GCTACGACCC GGCGCTGTTC CTTCAGGCCA TGGGATGGGT CCAGGCGCTG
TTCGGCCGCG CGCTGCGCGC GGGCTGA
 
Protein sequence
MILHGDETAD IATASGPMRL HVLRPAADGA FPGVVLFSEI YQVTAPIRRL AAMVAGLGHV 
VAVPEVYHEY EPAGTVLAYD KPGTDRGNEL KYAKPLASYD DDARAAVAWL AAHPACTGRI
GTMGVCLGGH LAFRAAMNPA VSAAACFYAT DIHSASLGQG RHDDTLQRLG EIPGEVMMTW
GRQDPHVPFA GRQMIREALE AAGVRYEWHE LNAQHAFLRD EGPRYDPALF LQAMGWVQAL
FGRALRAG