| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2983 |
|---|
| Symbol | rpsE |
|---|
| ID | 6976417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3260355 |
|---|
| End bp | 3260933 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643392491 |
|---|
| Product | 30S ribosomal protein S5 |
|---|
| Protein accession | YP_002277328 |
|---|
| Protein GI | 209545099 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0098] Ribosomal protein S5 |
|---|
| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.394302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTG AACCGAGAGA AGGCGGCCGG GGTGGCCGCG ATCGTGAGCG CGAAGGCGAC
GATCTCGTCG ACAAGCTGGT CACGATCAAC CGTGTTGCGA AGGTCGTGAA GGGCGGCCGT
CGCTTTGCTT TCGCCGCGCT GGTCGTGGTG GGGGACCAGA AGGGTCGCGT CGGCTACGGC
GCCGGCAAGG CCCGCGAGGT GCCCGAGGCA ATCCGCAAGG CGACCGACCG CGCCAAGCGC
GCGATGATCC GCGTCCCGAT GAAGGAGGGC CGTACCCTCC ATCACGACGT CGCCGGTCAT
TTCGGCGCCG GCAAGGTGGT GCTGCGTTCG GCCGATGCCG GCACGGGCAT CATCGCGGGC
GGCCCGATGC GCGCGGTGTT CGAGAGCCTG GGCATCAATG ACGTGGTCGC GAAGTCACTG
GGGACCCGCA ACCCGCATAA CATGGTCAAG GCGACCTTCG CCGCGCTGGA GCGTTGCGCC
AGCCCGCGCA CGGTGGCCAA CCGCCGTGGC AAGAAGGTGT CGGACATCCT GGGCCGCCGC
GACGTGGCCG GAACCGGGGA GGCCGCCGCC GATGTCTGA
|
|---|
| Protein sequence | MAREPREGGR GGRDREREGD DLVDKLVTIN RVAKVVKGGR RFAFAALVVV GDQKGRVGYG
AGKAREVPEA IRKATDRAKR AMIRVPMKEG RTLHHDVAGH FGAGKVVLRS ADAGTGIIAG
GPMRAVFESL GINDVVAKSL GTRNPHNMVK ATFAALERCA SPRTVANRRG KKVSDILGRR
DVAGTGEAAA DV
|
|---|
| |