| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2802 |
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| Symbol | |
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| ID | 6976233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3067351 |
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| End bp | 3067896 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643392310 |
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| Product | conjugal transfer protein precursor |
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| Protein accession | YP_002277149 |
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| Protein GI | 209544920 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCT TCGGCACCAT CATGTCGACC TATGTCGCGA TGCTCGCTGC CGGCGCGCTC
GTGTTCTTCC ATCCAGCGCC GCGGCTGATC TGGAACGCCA CGGCCAGCAC GCCGACGGGA
CTCTACGCAC TACGCCCGGC GGGCAAGCTC CACGCGCTCG AACTAGTCGC CGTGCGCCCG
CCTGAGCCGA TCGCCAGCTA CCTTGCCGAT GGCGGTTTCC TGCCGAGAGG CGTGCCGCTG
CTGAAGCATG TCATGGCGGT CGCCGGGCAG ACCGTGTGCC GGGAAGGGGA TGCCGTCATC
GTCGATCACG TCGAAGCCGG CGTGGCCCGA GACCGCGATC ATCTTGGCCG TCCCCTGCCT
CGCTGGAGCG GCTGCCGCAC GCTCATCCCG GGCGAAGTCT TCCTCATGAA CCCAACCGTC
CCGGACAGCC TGGACGGCCG CTATTTCGGC CCGCTCCCCG TCACTTCGAT CGTCGCGCGC
GCGGTCCCGC TGTGGACCGA CGAGGCCGGT GACGGCCGCT TCGTGTGGCG CGCCGCCGCC
GATTGA
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| Protein sequence | MSRFGTIMST YVAMLAAGAL VFFHPAPRLI WNATASTPTG LYALRPAGKL HALELVAVRP
PEPIASYLAD GGFLPRGVPL LKHVMAVAGQ TVCREGDAVI VDHVEAGVAR DRDHLGRPLP
RWSGCRTLIP GEVFLMNPTV PDSLDGRYFG PLPVTSIVAR AVPLWTDEAG DGRFVWRAAA
D
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