| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2591 |
|---|
| Symbol | |
|---|
| ID | 6976021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2846341 |
|---|
| End bp | 2848734 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643392108 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_002276949 |
|---|
| Protein GI | 209544720 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACC GGCAGACCAT GTGGACCAGC GCGCGCAACA GGATCGTGAG GCGGTATCCG
CCCCCTGCGT CCGGACAGCC CGCCTTCAGG CAGGGCGCGC GAACCGTCAC GCTCTCCCTG
ACGCTCAGCC CGGTGGTCGC CGGGTTGGTG TTCGGCCTGG GCGCCGCATC CGCCGCCGAC
CGGCCCCAGG CCGAGACCGA GGCCGGAACG AAGACCGAGA CGAAGGCCGG CACCAGGACC
GCCCCGAAGA CCGCCCCGAA GGCTGGCACG CGGGCCGCCG CGACGCCCCG CAAGGGTCCG
GCGCAGGACG CGGCGAAAGC GAAGGGGGAA CGCATCCTCG TCACGGGCCG GAAATCCCCG
ACCGTCGCGT CCTCGGGCAC CAAGACCGAC ACGCCCCTGG TGGACACGCC CCAGTCCGTG
ACGGTCATCG ACCGTCATGA AATGGACATA CGCGGCGTCC TCAGCCTCAG CCAGGCGGTG
CGCTATACGG CCGGCATCAC GCCGGACCAG CGCGGGTCCA CGGCCACGCG CTACGACCTG
TTCGCGCTGC GCGGCTTCAC GATCCCGAAC TTCCTCGACG GGCTCAAGCT GCAGGACAGC
CCCACCGGCT ACGCCACGGC CCAGATCGAC ACCTCGCGCC TGGACCGGAT CGAAATCCTC
AAGGGCCCGG CATCGGCGCT GTACGGGCAG TCCAGTCCCG GCGGCCTGGT CGCGATGTCC
AGCAAGCTGC CCACCAGCGC CACGTCCTAC GGCAGCCTGG TCGCGACCGG CGGCAGCTTC
GACCTCTATC GCGTGGATGG CGATGTCGGC GGCGCACTGA CCGGCAACGG GTTCGTGCGC
TACCGGCTGT ACGGCACCGC CAACGGCTCG CACAGCCAGC TCAGCCAGAC GCAGAGCCGC
CGCTACAGCA TCAGCCCGGC CGTGACCTTC GGCGGCGACG GCGACACGAC GCTGACCCTG
CTGGGCAATG TCCAGGACGA CCCGCAGAAT GCCTCGTACG GATCGGTGCC GCTGGAAGGC
TCGCTCAAAC GCGCGGCCTT CGGGTACATC AGGCAGAATT TCTACGACGG CGACCCGAAT
TTCGAGGAAT TCAACCGCCG GCAGTGGGCG ACGACCTATA TCTTCAACCA CCGCTTCAAC
GCCGACTGGG CGTTCTCGTC ACGCGGCCGG CACGACGACG TCAAGACGGT CTATGAAAGC
GTCTATAGCG AGGGCGTGTA TCTCGACCCC GACTATGAGC GCGATTACGC GCAGGAAGCC
CTGGGCAATT TCAGCCGGGG CACGGCCTAC GCCCGCGAGC ATCTTCGGAA CCTGGCCTTC
GACAACCAGC TGACCGGCCA TTTCTCCACC GGGCCGCTGC GCCACGCGCT CATGCTGGGC
TTCGACTACC AGGAAAGCGA GGCGACGGAA CTGGACGGAT TCGGCTCCGC GCCGTCCATC
AACGTGCTGC ACCCGGTCTA TCGCCAGCAG ATCACGCCGC CCGCGATCTC CAACAACTAC
CTGACCGACC AGCACCAGAT CGGCGTCTAC GCGCAGGACC AGGTCGATCT CGGCAACCTG
CACCTGACCG GCAGCCTGCG CAACGACTGG TACCGCAGCC ACCAGCAGGA TACCATCGGC
GGCAGCTACA GCAGCCAGAA CCCGGAAATG ATCACCTGGC GCGCCGCCGG CCTGTATCAT
TTCAAGTTCG GCCTGGCCCC GTACATCAGC TATTCGACCT CGTTCCAGCC GCAATCCGGC
GTGGTCTCCA GCAATGGCGG CCAGTCGACG CGCCAGGCGG ACCCGACGGT CGGCAAGCAG
CTCGAAGGCG GCTTCAAATA CCAGATCCCC GGCCTGCCCA TCCTGCTGAC GGCCGCCGGC
TTCCATATCG AACAGACGAA CGTGCTGGTC GCGGTCCCGA ATTCCAACTA CAGCACCGAA
AGCGGCAAGG TCCGCTCCGA CGGGTTCGAG TTCGAGGCGC ACGTGAACGT GTACAAGGGC
CTGACCGTCG TCGCCACGGC CAACACCCAG AAGGTCCGCG ACCTGTCGAC CGGCAAGCCG
CTGATCCAGG TCGGCAAGGG CGGCGAAACC CTGTTCGGCT ACTACACCAT GCCGTCGGGC
CGGCTGAAGG GCCTGGGGTT CGGCGGCGGC CTGCGCCACG TGGACAGCGC CTTCGGCGGC
ACCGCCTCCT ATGGCGACAT CACGGTGCCG AGCTATACTC TGTTCGATGC ATCCGCCAGC
TACGACCTCG CCAATCTCGG GCATGCCTTC ATCGGCTGGA AAGTCCAGGC CAGCGTCCGC
AACCTCTTCA ACAAACGGTA CGTCGCAAGC TGCTACGGCT ACGCCCCGTA CGACGAATGG
TGCTGGTACG GCGAACGCCG GACGGCCCAG GCCTCGCTCG GCTTCAGCTG GTAG
|
|---|
| Protein sequence | MKDRQTMWTS ARNRIVRRYP PPASGQPAFR QGARTVTLSL TLSPVVAGLV FGLGAASAAD
RPQAETEAGT KTETKAGTRT APKTAPKAGT RAAATPRKGP AQDAAKAKGE RILVTGRKSP
TVASSGTKTD TPLVDTPQSV TVIDRHEMDI RGVLSLSQAV RYTAGITPDQ RGSTATRYDL
FALRGFTIPN FLDGLKLQDS PTGYATAQID TSRLDRIEIL KGPASALYGQ SSPGGLVAMS
SKLPTSATSY GSLVATGGSF DLYRVDGDVG GALTGNGFVR YRLYGTANGS HSQLSQTQSR
RYSISPAVTF GGDGDTTLTL LGNVQDDPQN ASYGSVPLEG SLKRAAFGYI RQNFYDGDPN
FEEFNRRQWA TTYIFNHRFN ADWAFSSRGR HDDVKTVYES VYSEGVYLDP DYERDYAQEA
LGNFSRGTAY AREHLRNLAF DNQLTGHFST GPLRHALMLG FDYQESEATE LDGFGSAPSI
NVLHPVYRQQ ITPPAISNNY LTDQHQIGVY AQDQVDLGNL HLTGSLRNDW YRSHQQDTIG
GSYSSQNPEM ITWRAAGLYH FKFGLAPYIS YSTSFQPQSG VVSSNGGQST RQADPTVGKQ
LEGGFKYQIP GLPILLTAAG FHIEQTNVLV AVPNSNYSTE SGKVRSDGFE FEAHVNVYKG
LTVVATANTQ KVRDLSTGKP LIQVGKGGET LFGYYTMPSG RLKGLGFGGG LRHVDSAFGG
TASYGDITVP SYTLFDASAS YDLANLGHAF IGWKVQASVR NLFNKRYVAS CYGYAPYDEW
CWYGERRTAQ ASLGFSW
|
|---|
| |