| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2407 |
|---|
| Symbol | |
|---|
| ID | 6975837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 2669260 |
|---|
| End bp | 2670096 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643391930 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002276772 |
|---|
| Protein GI | 209544543 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA AGACAGGCGA CCTGACGGGC AAGGTGGCCC TGGTCACGGG CGGCACGCAG
GGGCTGGGTG CCGCCATCGC CACCGTGTTC GCGCAGCGCG GCGCCAAGGG GATCGTGATC
TGCGGCCGCA ACCGTCACAA GGGTGAAGAC GTCGCGGCCC GGCTGCGGCG CGATTTCGAT
ACCGACGTGC GCTTCGTGGC CGCCGACCTC GCGGACATGG ACGACGTGCG GGCCGTCGTG
CAGGCGTGCG ACGGCGCGTT CGGCCGGATC GACGCGCTGG TGAACGCGGC GGGACTGACC
GATCGCGGCA CCATCCTGGA CACCACGCCC GAATTGTTCG ACCGCATGAT GGCGGTCAAC
GTGCGCGCGC CCTTTTTCCT GATCCAGGAC GCCGTGAAGA TCATGATCCG GGAATCGACC
GAAGGCACGA TCGTCAATAT CGGCTCGATG TCCGCCATGG GCGGGCAGCC TTTCATTGCC
GCCTATTGCG CCTCGAAGGG GGCGCTGGAA ACGCTGACCC GCAATACCGC CTATGCGCTG
CTGCGCAATC GCATCCGGGT CAACGCGCTG AATATCGGCT GGATGGCGTC GGACGGTGAA
GACCGCATCC AGCGCGAATT CCACGGCGCG TCCGAGGGCT GGCTGAAGGA CGCGGCCCAG
ACGCAGCCCT TCGGCCGCCT GATCAGCCCC GAGGAGGTCG CGCGCGCCTG CGCCTATCTG
TCCAGCGCCG AATCCGGCCT GATGACGGGA TCGGTCATCT GTTTCGACCA GTCGGTCTGG
GGCGCGTACG ATGATTCGCC CCATCCCGCC CAGGCCATGC GCCTGCACGG CGAATAA
|
|---|
| Protein sequence | MTTKTGDLTG KVALVTGGTQ GLGAAIATVF AQRGAKGIVI CGRNRHKGED VAARLRRDFD
TDVRFVAADL ADMDDVRAVV QACDGAFGRI DALVNAAGLT DRGTILDTTP ELFDRMMAVN
VRAPFFLIQD AVKIMIREST EGTIVNIGSM SAMGGQPFIA AYCASKGALE TLTRNTAYAL
LRNRIRVNAL NIGWMASDGE DRIQREFHGA SEGWLKDAAQ TQPFGRLISP EEVARACAYL
SSAESGLMTG SVICFDQSVW GAYDDSPHPA QAMRLHGE
|
|---|
| |