| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2348 |
|---|
| Symbol | |
|---|
| ID | 6975778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 2601560 |
|---|
| End bp | 2603671 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643391875 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_002276717 |
|---|
| Protein GI | 209544488 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0773739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCCA TATTCACCCA ACCTGTTCGG GCCTTCGAAG GCGGGGCCAC CGGCCCGTCC
GCCGAGGATG TGCTGTGCAT CAACACCATC CGTACCCTGT CCATGGACGG GGTGCAGAAG
GCGAATTCCG GCCATCCGGG CACGCCGATG GCCATGGCGG CGCCGGCCTA CGCCCTGTGG
CAGAACGTCC TCAGCTACGA CCCGGCCGAT CCGCTGTGGC CGAACCGCGA CCGGTTCGTG
CTGTCGATCG GCCATGCCTC GATGCTGATC TATTCGCTGA TCTACCTGGC CGGCATCCGC
GACGTGAAGC ACGGCACGGT GCTGGACGCG CCGTCGCTGA CGCTGAAGGA CCTGGAACAG
TTCCGCCAGC TCGATTCCCG CACCCCCGGC CACCCGGAAT ACCACCACAC GGCGGGCGTC
GAGACGACGA CCGGCCCGCT GGGCCAGGGC TGCGGCAATT CCGTCGGCAT GGCGATGGCG
GAAAAATGGC TCGCCACCCG CTTCAACAAG CCGGGCTTCC CGCTGTTCGA CTATCACGTC
TACACGTTCT GCGGTGACGG CGACATGATG GAAGGCGTGG CCAGCGAGGC CGCGTCGGTG
GCCGGCCACC TGCGCCTGGG CAACCTGACC TGGATCTACG ACAGCAACCG CATCTCGATC
GAGGGCTCGA CCGACATCGC CTTCACCGAG AACGTGCAGA AGCGGTTCGA GGGCTATGGC
TGGCACGTGC TGGAGGTCAA GGACGCCAAC GACCAGGCGG CCTTCCTGGC GGCGCTGGCG
GACGCCAAGG CCGAAACCGG CCGTCCGACC CTGATCATCG TGCATTCCGT CATCGGCTGG
GGCGCGCCCC ACAAGGCCGG CACCGCCTCG GCGCACGGCG AACCGCTGGG CGACGCGGAA
ATCCGCGGCG CGAAGAAGGC CTATGGCTGG CCGGAAGACA AGAGCTTCTA CGTCCCCGAC
GGCGTGCTGG AACATTTCCA GAAGGGCCTG GGCGCCCGTG GCGCCGCTGC CAGCGCGCAG
TGGAAGGCGC TGTACGCGTC CTACGCCAGG GACTATCCCG ACCTGGCGAA GGAAGTGGAC
GCCATCCTGT CCAATCGCCT GCCGGAAGGC TGGGACAAGG ACATCCCGGT GTACGAGCCC
AGCGCCAAGG GCGTGGCCTC GCGCCAGAGC TCGGGCGAGG TGCTGAACGC GATCGCGCCG
AACTTCCCGT GGCTGATCGG CGGCTCGGCC GACCTGTCGC CGTCCACCAA GACCAACCTG
ACCTTCCAGG GCGCGGGCTC GTTCCAGCCG CCGGAATGGA ACGGCACCTA TGGCGGGCGC
AACCTGCATT TCGGCGTGCG CGAACACGCC ATGGGCTCGA TCTGCAACGG CATCTCGCTG
GCGGGCATCC GGGCCTACTG CTCGGGCTTC CTGATCTTCT CGGACTACAT GAAGCCGCCG
ATCCGCCTGT CGGCGCTGAT GAACCAGCCG GTCGTCTATA TCTTCACGCA TGATTCCATC
GGCGTGGGCG AGGACGGTCC GACCCATCAG CCGATCGAAC AGCTCGTGCA GCTTCGCGCC
ACCCCCGGCG TGACGCTGAT CCGCCCGGCG GACGCGAACG AGGTCGCGGA AGCGTGGCGC
ACGCTGATCC CGATGACCGA CCGCCCGTCG GTGCTGATCC TCAGCCGCCA GAACCTGCCG
ACGGTGGACC GCACGGTCTA TGCCCCGGCG TCGGGCCTGG CCAAAGGCGC CTACGTGCTG
GGCGATTGCG ACGGCACGCC GGACGTCATC CTGATGGCGA CGGGCAGCGA GGTCGGGCTG
GTGGTCTCGG CGTACGAGAC GCTGAAGGCC GAAGGGGTCA AGGCGCGCGT GGTCTCCATG
CCGTCGTGGG ACCTGTTCGA GGCCCAGCCG AAGGAATACC GCGACAGCGT CCTGCCGCCG
ACGGTCACCA ACCGCGTCGC GGTCGAAATG GCCTCGCCGG TCGGCTGGGA CCGCTATGTC
GGCCTCAGCG GCTCGATCAT CGCCATGCAC GGCTTCGGGG CCTCGGCCCC GGCCGGCGAA
CTGTTCAAGA AATTCGGCTT CACCGTCGAA GCCGTCCTGG CCGAAGCGCG CAAGCAGGTG
GCCAAGGGTT GA
|
|---|
| Protein sequence | MRSIFTQPVR AFEGGATGPS AEDVLCINTI RTLSMDGVQK ANSGHPGTPM AMAAPAYALW
QNVLSYDPAD PLWPNRDRFV LSIGHASMLI YSLIYLAGIR DVKHGTVLDA PSLTLKDLEQ
FRQLDSRTPG HPEYHHTAGV ETTTGPLGQG CGNSVGMAMA EKWLATRFNK PGFPLFDYHV
YTFCGDGDMM EGVASEAASV AGHLRLGNLT WIYDSNRISI EGSTDIAFTE NVQKRFEGYG
WHVLEVKDAN DQAAFLAALA DAKAETGRPT LIIVHSVIGW GAPHKAGTAS AHGEPLGDAE
IRGAKKAYGW PEDKSFYVPD GVLEHFQKGL GARGAAASAQ WKALYASYAR DYPDLAKEVD
AILSNRLPEG WDKDIPVYEP SAKGVASRQS SGEVLNAIAP NFPWLIGGSA DLSPSTKTNL
TFQGAGSFQP PEWNGTYGGR NLHFGVREHA MGSICNGISL AGIRAYCSGF LIFSDYMKPP
IRLSALMNQP VVYIFTHDSI GVGEDGPTHQ PIEQLVQLRA TPGVTLIRPA DANEVAEAWR
TLIPMTDRPS VLILSRQNLP TVDRTVYAPA SGLAKGAYVL GDCDGTPDVI LMATGSEVGL
VVSAYETLKA EGVKARVVSM PSWDLFEAQP KEYRDSVLPP TVTNRVAVEM ASPVGWDRYV
GLSGSIIAMH GFGASAPAGE LFKKFGFTVE AVLAEARKQV AKG
|
|---|
| |