| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2211 |
|---|
| Symbol | |
|---|
| ID | 6975639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2453007 |
|---|
| End bp | 2454302 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643391740 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_002276584 |
|---|
| Protein GI | 209544355 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.603801 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGCG CTTGCCAAGG CCACGACCAC CCGGGACGCG GTGCCGCGCG CCGCGCCGCC
GGCAGGCGGA CCGTCATCGT GGCCGCCGCC CTGGCCGCCG CCATCGGGAC GGCGCCGGCC
GCGCGGGCGG GCGGGCTGTC CTTTCATGAC GCGGTCACCG CCGCCTGGAC GGCCGATCCG
GTCCGGGTGG AACTGAGCAC GAACCGCGAG TCCGCCGATG CGCGGGCCGA TGCCGCGAAA
TCCTGGTTTC CCGGTGGCCC CGTCGTGTCG GCGCAGTATT TCGACGATCA TTTCATCGGC
AGCAATATCG GCTACACGAC CTATCAGGGC ACCGTGTCGG TCCCGCTGTG GCTGCCCGGG
CAGGGCACCG CGACCACGCG GGTGGCGCAG GCCGAATCCG CCACCATCCA GGAGCGGCTG
AATGTCGAGC ACATGGCGGT GGCGGTGCGG GTGCTGGAGG CGACCGGCAC GCTGGTGATC
GCCCAGCGGC GCCATGCCCT GGCGCTGTCC ATGCTGGGCA TCATGCAGCG GATCGACGCC
GCCGTGGGCC GGGCGGCGCG GGGCGGGGAA TCCCCCCGGG CCGACCAGCA GGCCGCCGAC
GCCGAACTGG CCGCGTCCCG GACCGAAATC GGGCTGGCGC AGGAACAGGT CGATGCCGCC
GAAGCGGCGC TGACAACCTT GCTGGGCCGC CCCGGCCTGC CCGATATCCT GTCCTATGAC
GCACGCTTCC TGGCCCGCAC GCGCCTGGAT ACCCCCCAGT TGATCGAGGA CAACGATCCG
CGCGTGCGCG CCGCCCGCCG GGGCGTGATG GCGGCCGAGG AAGGGGTGCG GCTGGCCCGG
GCGTCCTTCA TGCCCAATCC CGAGATCGGC GTCGGCGCGA TCCATGAAGG CCAGTACGGC
AGCCCGTGGG ACAACCGGGT GGGCGTCAAC ATTACCGTTC CGCTGCCCAG CGAGGCCCGC
AGCGTGCCGA TGATGGCCGA CGCCCGGAAC AAGCTGGCGG CGGCCAACAG CCAGGACGTG
CAGGCGCGGC GCATGGTGCG GGTGGAACTG GCGCAGGTGC GCGCCCGGCT GGACGCCGCC
GGCACGACCC TGAACAGCGC CCGGGCATCG GCCGGCGCGC TGAACCGGCG CGCCGATGAG
ATGGAACGGT CCTGGCAGGT AGGAGAAACG ACCCTGATCG AGGCATTGCG CGCGCGGCAG
GCCGCCTATA ACGCCATCCT GTCCCTGAAC GCGGCCGATG TCGGGTGGCA CGCCGCCATC
GTGCGGGCCG CGATTGCATC GGGCATGACA CCATGA
|
|---|
| Protein sequence | MDSACQGHDH PGRGAARRAA GRRTVIVAAA LAAAIGTAPA ARAGGLSFHD AVTAAWTADP
VRVELSTNRE SADARADAAK SWFPGGPVVS AQYFDDHFIG SNIGYTTYQG TVSVPLWLPG
QGTATTRVAQ AESATIQERL NVEHMAVAVR VLEATGTLVI AQRRHALALS MLGIMQRIDA
AVGRAARGGE SPRADQQAAD AELAASRTEI GLAQEQVDAA EAALTTLLGR PGLPDILSYD
ARFLARTRLD TPQLIEDNDP RVRAARRGVM AAEEGVRLAR ASFMPNPEIG VGAIHEGQYG
SPWDNRVGVN ITVPLPSEAR SVPMMADARN KLAAANSQDV QARRMVRVEL AQVRARLDAA
GTTLNSARAS AGALNRRADE MERSWQVGET TLIEALRARQ AAYNAILSLN AADVGWHAAI
VRAAIASGMT P
|
|---|
| |