Gene Gdia_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2020 
Symbol 
ID6975446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2242327 
End bp2242908 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content69% 
IMG OID643391549 
Producthypothetical protein 
Protein accessionYP_002276395 
Protein GI209544166 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTG CTGCCGTCGC TGTGTTCTGT GGGTCGCGTT TCGGGGCCCG TCCCGATTTC 
CTGGCGACGG CGCGTGAAAT GGGCACCAGC CTGGGCCAGG CGGGCATGCG GCTGGTCTAT
GGCGGCGGCG ATGTCGGGCT GATGGGCGCG GTCGCGGATG CCACGCTGGC GGCGGGGGGC
CTCGTCTCGG GCGTGATCCC GACCTTCCTG CAGGCGCGCG AGGTCATGCA TGACGGCGTG
ACCGACCTGA CGGTCACGGA TTCGATGCAC AGCCGCAAGC AGCTGATGTT CGCGCGGGCC
GATGCCTTCG TCGTGCTGCC CGGCGGCCTG GGCACGTTCG ACGAGACGAT GGAGATCCTG
ACCTGGCGGC AGTTGAAACT GCACGACAAG CCGATCTTCG TCGTCAATGT CGCGGGCTGG
GCCGACCCGA TGCTGGCGAT GCTGCACGCC GCCGTGCAGA ACGGCTTCGC CGAGGACGCC
GCCCTGAACC TGTTCGAGGT CGTGCCCGAC GTCGCGACCA CGATGGACCG TCTGCGCACC
ACGGTCCGTG GCCCCGCCAC CGAGGATGTC AGCCGCCTGT GA
 
Protein sequence
MSVAAVAVFC GSRFGARPDF LATAREMGTS LGQAGMRLVY GGGDVGLMGA VADATLAAGG 
LVSGVIPTFL QAREVMHDGV TDLTVTDSMH SRKQLMFARA DAFVVLPGGL GTFDETMEIL
TWRQLKLHDK PIFVVNVAGW ADPMLAMLHA AVQNGFAEDA ALNLFEVVPD VATTMDRLRT
TVRGPATEDV SRL