| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2013 |
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| Symbol | |
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| ID | 6975439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2233636 |
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| End bp | 2235210 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643391542 |
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| Product | protease Do |
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| Protein accession | YP_002276388 |
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| Protein GI | 209544159 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.316391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACG AGCTTCAGCC GATGTCTTCT CTCCGCGCCC GCCGGATGCG GGGCGGAATC
CTGGCCGCGC TGGTTGCGGG AACCATGCTG GGGGGCGTGG CCGCCGACGG GCTGGTCCCC
GTGGCGCGGG CCGACGATAC CGGGGTGATC CGTCCCGATA CGCAGGTCCA GACCCTGCCG
AACTTCGTCA ACCTGGTGAA GCAGGTCCGG CCCGCCGTGG TGTCGATCAC CTCCAGCATC
CGTGCCGAGG ACCTGGGGGA CGAAGGCGGC GGCGGCGCCG AGGGGCAGCA GCAGATGCCC
TTCCCGTTCC CCTTCCCGTT CCAGATGATG CCGCAGCAGC AGCGCCGCAC GGTCGAGGCG
CGGGGATCGG GCTTCATCAT CTCGGCCGAC GGCTATGTCG TGACCAACAA CCATGTGGTC
AAGGGCGCGA CCAAGGTCAC GGTGACGCTG GATGACGGCA CCACCCTGCC GGCCAAGATC
GTCGGCCGCG ATTCCAAGAC CGACCTCGCG CTGCTGAAGG TCACGTCGCA GGGCAAGCTG
CGCTTCATCG AACTGGGCGA TTCCGACAAG GTCGAGCCCG GGGAATGGGT GGTCGCGGTC
GGCAATCCCT ACGGGCTGGG CGGCACGGTC ACCGCCGGCA TCGTCTCGGC GCGCGGGCGT
GACATCGGCG ACGGGCCGTA CGATTCGTTC ATCCAGGTCG ATGCCCCGAT CAATCGCGGC
AATTCCGGCG GCCCGCTCTT CACCCAGGAC GGCAAGGTCG TGGGCGTCAA TACCGCCATC
CTCTCGCCCT CGGGCGGGTC GATCGGCATC GGCTTCGCCA TCCCGTCCGA CGTGGTGAAG
AACGTCGTCT ACCAGTTGCA GAAGACCGGG CACGTCACCC GGGGTTACCT CGGCGTGGTC
GCGCAGGTGA TCACGCCCGC GATGGCCACG GCGCTGGGCC TGAAGCCCGC GGCGCCCGGC
GCGCCGCCCA GCGGCGCCCT GGTCGCCAGT GTCAGCAACG GCAGCCCGGC CGAAAAGGCG
GGGATCAAGG CCGGGGACGT GATCACCACC CTGAACGGGC AGAAGATCGA CAGCCCGCAT
GATCTGGCGG TCAAGGTGGC CTCGATCGTG CCGGGCAGCA AGGCGGCGGT GAACTATATG
CGCGGCACGG CCGCGCAGAG CACGACGGTC ACGATCGCCA ACCTCTCCGG CGCTCCGTCG
CCCGACGGCG CGGTCGGGGA CAGGAACGAC GGCGGTCCGC GCCTGGGCGT CTCGCTGTCG
CCCCTGACGT CGGACCTGCG CCAGCAACTG GGCCTGGACG GGTCGGTGCG CGGCGTCGTC
GTCAGCGACG TCCAGTCGGG TTCGGCGGCG GAACAGGCCG GAATCCACGC GGGCGACGTG
ATCCAGGCGG TGGGCAACAA GCCGGTGGAA AACCCCGGCG CTACCGTCAC CGCCGTCCGC
GCGGCGCTGA AATCCAACCA GTCGGTCCTG CTGCGCATCC TGCGCAACGG GCAGAACATC
TTCGTCGCCG TCACGCCGGG CTCGGATGAG GGCGACAGCG GCAATGGCAA CAGCGACCCC
GACGGCAACG ACTGA
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| Protein sequence | MSDELQPMSS LRARRMRGGI LAALVAGTML GGVAADGLVP VARADDTGVI RPDTQVQTLP
NFVNLVKQVR PAVVSITSSI RAEDLGDEGG GGAEGQQQMP FPFPFPFQMM PQQQRRTVEA
RGSGFIISAD GYVVTNNHVV KGATKVTVTL DDGTTLPAKI VGRDSKTDLA LLKVTSQGKL
RFIELGDSDK VEPGEWVVAV GNPYGLGGTV TAGIVSARGR DIGDGPYDSF IQVDAPINRG
NSGGPLFTQD GKVVGVNTAI LSPSGGSIGI GFAIPSDVVK NVVYQLQKTG HVTRGYLGVV
AQVITPAMAT ALGLKPAAPG APPSGALVAS VSNGSPAEKA GIKAGDVITT LNGQKIDSPH
DLAVKVASIV PGSKAAVNYM RGTAAQSTTV TIANLSGAPS PDGAVGDRND GGPRLGVSLS
PLTSDLRQQL GLDGSVRGVV VSDVQSGSAA EQAGIHAGDV IQAVGNKPVE NPGATVTAVR
AALKSNQSVL LRILRNGQNI FVAVTPGSDE GDSGNGNSDP DGND
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