| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1948 |
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| Symbol | |
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| ID | 6975374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2161569 |
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| End bp | 2164016 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643391477 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_002276323 |
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| Protein GI | 209544094 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCTT CCCTGATCCG CCGTCGTATT TATCCCGCCC CGTTCATGGC GGGCCTGGCG
CTGCTCTATT CCGGGATTCA CGTCCATGCC GCCGACGCGG CAACCGACAC CAAGACATCC
AAGCCCAAGC ATCATCGCCA CGCCGCCGGC AAGGCGGCTG CTGCGGGAAA GGCGGCGGCG
CATAATCCGG CGAAGGCCGC CCCTGCCCCG GCCGTCGCCG CGACCGGCAC GACGGCCGCC
CGGCCGCTCT ATGCCCCGCC GGGGACGACA AGCACCATTA CCCCGACGGA AGAAAACCTG
ACTGTCGTTG GCAGTCCGAT GAACATCCTG CATCAGGATA TCGGTCTCAG CCGCATGCCG
CAGGATGTCA TGCACACGCC GCAGACCGTC AATGTCGTGC CGCAGGTGCT GATGGAACAG
CAGAACGTGA AAACCCTCGA CGAGGCGCTG AGAAACGTGC CCGGCATTAC CGCATCGGTC
GGTGAGGGCG AAGGCGGGAT GAGCGGCGAC CAGTTCCTGA TCCGCGGCTT CCAGGCGCAG
AACGATATCT ATGAAGATGG CCTGCGCGAC TATGGCGTCT ATAGCCGCGA CAGTTTCGAT
TATGACCATA TTTCGGTCAT CAAGGGACCG TCGTCCGAGG TCTTCGGAAA CGGCACCACC
GGTGGCGCCA TCAACATGGT CACCAAGATG CCCCATCTGG GGAACAGCTA TAGCGGCCAG
TTTTCCGGCG GCTCGGCGGA CTATTACCGC GGGACGCTGG ACGTGAACCA GCAGATCGGC
GAATCCACGG CCATCCGCAT CGCCGGCATG GGCAATGAAA ATGACGAGGT CGGGCGTGAC
GACGTCTATT CCCATCGCTG GGGTATCGCG CCGTCCATCG CCTTCGGCCT GGGCAAGCCC
ACGACGCTGA CGATTGAATA TTTCCATCAG ACCGATAACC GCATTCCCGA TTACGGCGTG
CCGCTGCTGA CCAAGCCCGG CACGACCATC GCCCGTCCGG CCACCGAATT CGGCGTGAAT
CGCAACAACT GGTACGGCAC GCAGTACGAC CAGGACGATT CGAACGTCGA TATGCTGTCG
GCGCATCTCA AGCACGAATT CAACAGCCAT ATCACCTTCT ATGACGACCT GCGGGGGGGG
ATGTACCAGC GTTATTTCTC CGCGTCGTGG GAAGGGTGTA ATGCCACGTG TAACGCGGCA
TATTTCGGAA ACGATCCCGC CAGCGCGCTT GTCGATCGCC GTGGCCATCT GGGTGGTCCG
GAACCCTACC AGCAGAACGA CTGGTCGGTG CAGAACGTCG CGTCAGCGAT TGCGAAATTC
AATACCGGCA TGCTGAAGCA CCAGATCATC GCCGGGTGGG ACGTGGCCCA TGTCTATGAC
CGTCGTACGA ATTACGCCTA CAACTACAAT GGCCTGAATG GAACGCAGAC CGACACGACC
GGCCTCGTCA ATCCGACCAA TTTCGTGCCA GGACTCCTGC TTGGGAATGT CGGCCAATAC
AGCAGCAACC TTGTGAATAT CAGCGGTGTC GGACGCGCGC TTCACAAAAC CGGCGTTGCG
ACCGATGTCG GGGCTTTCTT CTCGGATCAG GTCTGGTTCG CACCGTGGTT CTCGGCCCGC
GCCGGTTTCC GCTGGGACCA TTGGGACAGC CATTATTCCG CCAACGAGGG AATGGTCGGC
ACGGGCGTTT CCTACGGCCA GAACCAGGAT ACCTACAATC CGACCGTCAA CCTGATGTAC
ACGCCCAATG ATGACACCAT GGTCTATTTC AACTGGGCAC AGTCGACCAC ACCTCTCGGC
CTGTATGTCA CCAACAGTTC CGAACCGCTC CGGGCGACGA ATGAAGGATA CGCGCCGGAA
CGCAGCAGCC TTTACGAAAT CGGCGCGAAA TACAATGCTT TCCACGGTCG TATGGGCTTT
ACCGTATCCG CCTTCAGGCT GGAAAAAGGC AATTCCCTTC TGACCGATCC GACCACCGGT
GACGTCACGC CGTCGAGCGA CCGCCAGCGG AACCAGGGAT TCGAATTGAG CGCATCCGGC
GAAATCCTGA AGAACTGGAA CGTGATTGCG ACCTACGCAT ATTATGATGC GAAAACGATC
GCGTCCGCCA CGGCGGCGGA TGTCGGCAAG CGCATTCAAT ATGCGCCGAA GAATTCGGCG
ACATTCTGGT CGACCTATAC GATCGCACCG GCCACTCCAT GGAACGTCAC GTTCGGCGGC
GGCCTGACCT GGCGGCAGAG CGTCTGGCTC GACCCCGCCA ATACGGCGAA GGTACCGGAT
ACCGTTGAAT GGGATGCGAT GATTTCGCAC AGCTTCCTCA AGCATTGGAA AGTGGCCATG
AACGGCTACA ACCTTGCCAA CAGGCTCAAT TATTCGAACC TGTTCAGCGA CCGCGTGACG
CCGTCGACCG GCCGGGCTTT CCTGTTCAAC ATCTCGGCCA CCTATTAA
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| Protein sequence | MPPSLIRRRI YPAPFMAGLA LLYSGIHVHA ADAATDTKTS KPKHHRHAAG KAAAAGKAAA
HNPAKAAPAP AVAATGTTAA RPLYAPPGTT STITPTEENL TVVGSPMNIL HQDIGLSRMP
QDVMHTPQTV NVVPQVLMEQ QNVKTLDEAL RNVPGITASV GEGEGGMSGD QFLIRGFQAQ
NDIYEDGLRD YGVYSRDSFD YDHISVIKGP SSEVFGNGTT GGAINMVTKM PHLGNSYSGQ
FSGGSADYYR GTLDVNQQIG ESTAIRIAGM GNENDEVGRD DVYSHRWGIA PSIAFGLGKP
TTLTIEYFHQ TDNRIPDYGV PLLTKPGTTI ARPATEFGVN RNNWYGTQYD QDDSNVDMLS
AHLKHEFNSH ITFYDDLRGG MYQRYFSASW EGCNATCNAA YFGNDPASAL VDRRGHLGGP
EPYQQNDWSV QNVASAIAKF NTGMLKHQII AGWDVAHVYD RRTNYAYNYN GLNGTQTDTT
GLVNPTNFVP GLLLGNVGQY SSNLVNISGV GRALHKTGVA TDVGAFFSDQ VWFAPWFSAR
AGFRWDHWDS HYSANEGMVG TGVSYGQNQD TYNPTVNLMY TPNDDTMVYF NWAQSTTPLG
LYVTNSSEPL RATNEGYAPE RSSLYEIGAK YNAFHGRMGF TVSAFRLEKG NSLLTDPTTG
DVTPSSDRQR NQGFELSASG EILKNWNVIA TYAYYDAKTI ASATAADVGK RIQYAPKNSA
TFWSTYTIAP ATPWNVTFGG GLTWRQSVWL DPANTAKVPD TVEWDAMISH SFLKHWKVAM
NGYNLANRLN YSNLFSDRVT PSTGRAFLFN ISATY
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