| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1927 |
|---|
| Symbol | hemE |
|---|
| ID | 6975351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2137283 |
|---|
| End bp | 2138344 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643391454 |
|---|
| Product | uroporphyrinogen decarboxylase |
|---|
| Protein accession | YP_002276302 |
|---|
| Protein GI | 209544073 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.849644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATA CAGGCAAACC CCTTCTGCGG GTCCTTCAGG GCGAGGCCGT ATGGCCCCCG
CCGATCTGGC TGATGCGTCA GGCCGGACGG TACCTGCCGG AATTCCGTGC CCTGCGCGAC
CAGGCCGATT TCATCACCCG ATGCATGACG CCCGACCTGG CGACGGAAAT CACGCTGCAA
CCGATCCGGC GCTACGCCAT GGACGGGGCG ATCCTGTTTT CCGACATTTT GATCCTGCCA
TGGGCGATGG GCCAGTCGCT GGATTTCGTG GCCGGCAAGG GACCCATCCT GGGCGCCATC
CGCAGCGAGG CCGACCTGGC GCGGCTGGAC CCGAAGCGCG TGCCCGACGC GACGGCCCCG
GTGATGGAAA CCCTGAGCCG CCTGCGCGCG ATTCTGGATG GGCCCGATCC GATCGGCGCG
GCCCAGGGCG GGCGCGTCAC CCTGCTGGGC TTCGCAGGCG CGCCCTTCAC CGTGGCGTGC
TACATGGTCG AGGGCCATGG CTCGCGTGAA TTCGATGCCA CGCGCGGCAT GGCCTATTCC
GATCCGCTGC TGTTCGACCG GCTGATGGCG ACGCTGACCC AGGCCACCGC CGACATGCTG
GTCGCGCAGA TCGACGCGGG GGCCGAGGCC GTGATGCTGT TCGACAGCTG GTCCGGCCTG
CTGCCGCCGG CGCAGTTCCG CCGCCACGTC ATCGCCCCGA CCCGCGCCAT CGTGCAGGAG
ATCCAGGCCC GCCGCCCCGG CGTGCCGGTC ATCGGCTTTC CGCGCCTGGC CGGGATCATG
GCGGCGGAAT ATGCGCGCGA GACCGGCCTG CGTGTCATGG CGCTGGATAC CGGCGCCGAC
ATGGCGGCGA TGGCCGGCCT GCTGCCGCCC GGCATGACGG TGCAGGGCAA CCTGGACCCG
CTGCTGCTGC TGGCGGGCGG CGATGCCATG GCGCAGGAAG CCCGCGCCAT TCGCGATGCG
ATGAAAGGGC GGCCGCACGT CTTCAATCTC GGCCACGGCG TGGTGCCCCC GACGCCGCCC
GAACATGTCG GTGATCTTGT GCGCACCGTC AGGGAGGTCT GA
|
|---|
| Protein sequence | MTDTGKPLLR VLQGEAVWPP PIWLMRQAGR YLPEFRALRD QADFITRCMT PDLATEITLQ
PIRRYAMDGA ILFSDILILP WAMGQSLDFV AGKGPILGAI RSEADLARLD PKRVPDATAP
VMETLSRLRA ILDGPDPIGA AQGGRVTLLG FAGAPFTVAC YMVEGHGSRE FDATRGMAYS
DPLLFDRLMA TLTQATADML VAQIDAGAEA VMLFDSWSGL LPPAQFRRHV IAPTRAIVQE
IQARRPGVPV IGFPRLAGIM AAEYARETGL RVMALDTGAD MAAMAGLLPP GMTVQGNLDP
LLLLAGGDAM AQEARAIRDA MKGRPHVFNL GHGVVPPTPP EHVGDLVRTV REV
|
|---|
| |