Gene Gdia_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1906 
Symbol 
ID6975329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2120207 
End bp2120959 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID643391432 
ProductABC-2 type transporter 
Protein accessionYP_002276281 
Protein GI209544052 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.228085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC TCGCCTTGCC CGCCGGCATC TATGGCCGCG AATGCGCCGC CGAGCTGAAA 
CGCTCCTGGC GCCTGCCGCA ATTCATCGTC CCGACCGTCC TGACCCCCGC CGCCTTCTAC
GCCCTGTTCA CGCTTGCCAT CCCCGCGCAC CCGTCGCCAT CGGAAGCCAC CGCCACCCTG
GCGACCTATG GCGTCTTTGC CGCCATAGGT CCGGCGCTGT TCGGCTTCGG CGCCGGCATC
GCGTCGGAAC GCGAACAGGG GCTGATCGAA CTCAAGCGCG CCTCCCCCAT GCCTGCCGGG
GCCTATGTCG CGGCGAAACT CGTCGCCACC CTTGCCGCCA CGGCCGCCGC CATCATGCTG
ATCGACGCCC TCAGCCTGAT TGCCGGTGTC AGGCTGACCG CCGCGCAATG GGGCGCCCTG
ACACTGCTCC ACCTCGCATC GGCCATCCCG TTCGCCCTGG TCGGCTTCGG AATCGGCATG
CGCATGAGCG CAAAGGGGGC GGTCGCACTC GCCAATGTCC TGTTCCTGGG GTCCGCCATC
CTGGGCGGCC TGTGGTTTCC CTCGCAGTTA CTGCCGGGGT GGATGCGCGC CATCGGCGAG
GTGCTGCCCT CGTACCACCT GGGGCAACTG GCCCGCTTCC TGGTCGGCGC CGACACGATC
GGAACCGTCG CCACGCACGC CGCCGCCCTG CTGGCCATGA CAGCCGCCGC CTTCCTCTGG
GCCCGGGCCG GCTGGCGCAG GAGCGCCGCT TGA
 
Protein sequence
MTDLALPAGI YGRECAAELK RSWRLPQFIV PTVLTPAAFY ALFTLAIPAH PSPSEATATL 
ATYGVFAAIG PALFGFGAGI ASEREQGLIE LKRASPMPAG AYVAAKLVAT LAATAAAIML
IDALSLIAGV RLTAAQWGAL TLLHLASAIP FALVGFGIGM RMSAKGAVAL ANVLFLGSAI
LGGLWFPSQL LPGWMRAIGE VLPSYHLGQL ARFLVGADTI GTVATHAAAL LAMTAAAFLW
ARAGWRRSAA