| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1880 |
|---|
| Symbol | |
|---|
| ID | 6975303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2096790 |
|---|
| End bp | 2097677 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643391406 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002276255 |
|---|
| Protein GI | 209544026 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.010243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGGTG TGCTGTTTTT CGCCGTCGTG CTGATCTGGG GCACGACATG GTTCGCCATC
CACGTGCAGG TGGGCAGCAC GCCGCCGGAA ACCGCGATCT TCTGGCGCTT CCTGATCGCA
TCGCTGACAC TGGGGGGCTG GCTGGGCCTG GCCGGGCGTC TGCGTCGGGT GCCCCTGCGG
CTGCATGCCT GGCTGGCCCT GATGGGTGCG TGCATGTTCT CGGGCAATTT CCTGGCGATC
TACGGGTCGG AGACCTACCT GGCCAGCGGC ACGGTGTCGG TCATTTTCAG CCTCGCGACA
TTGTTCAATA CCCTGAACCA GTGGCTGTTC TTTCGCCATC GTCCCAGCCT GCGCGGTATT
GCCGGCGGCT GCATCGCGAT TCTGGGCATC GTGTTCATGA CCGGCATGGC CGGGGCAGGC
GGGATCTCGC GGACCGGGGC GCTTCTGGCA TTGGCGGGAA CGGCCCTGTT TTCCTGCGGC
AACATGGTGT CGCGTCGCGT GGTGATGGCT GGCGTGGACC TGCCCAACGC GATCTTTCGC
GGCATGGCCT GGGGCTGTGT GTTCCTTGCC GTGCGCCTTG TTGCCGGTGG CGAATCCCTG
GCGGGTTCGA CCGACCCGGC ATGGATCGGG GCATTGCTCT ATCTGGCGCT GCCCGGATCG
GTGGTGGCGT TCCTGGCGTA TCTGCATCTG GTCCACCGGA TCGGTGCCGA CCGGGCGGCC
TATACCACCA TCCTGTCGCC TGTCGTGGCG CTGGCGATAT CGATCCTGTT CGAGGGAACG
CGCTGGACGT CGGGCATGAC GCTGGGGATC ATCCTGGTCC TGCTGGGCAA TCTCGTGACC
TTCGCCCGGC CCGGCCTGCT GCGCCTGCCA CGCGCTGTGC GGTTATGA
|
|---|
| Protein sequence | MLGVLFFAVV LIWGTTWFAI HVQVGSTPPE TAIFWRFLIA SLTLGGWLGL AGRLRRVPLR
LHAWLALMGA CMFSGNFLAI YGSETYLASG TVSVIFSLAT LFNTLNQWLF FRHRPSLRGI
AGGCIAILGI VFMTGMAGAG GISRTGALLA LAGTALFSCG NMVSRRVVMA GVDLPNAIFR
GMAWGCVFLA VRLVAGGESL AGSTDPAWIG ALLYLALPGS VVAFLAYLHL VHRIGADRAA
YTTILSPVVA LAISILFEGT RWTSGMTLGI ILVLLGNLVT FARPGLLRLP RAVRL
|
|---|
| |