| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1828 |
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| Symbol | |
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| ID | 6975250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 2030868 |
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| End bp | 2031764 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643391353 |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_002276203 |
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| Protein GI | 209543974 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCCA TCCAGGGCCA GAAAGAAGCT TCCTCCCCCT CGACCGACGG GGGCGTGTGG
GGGACCGAGG ACGTCTCGTC CGGCAAGGGG GCGGAGGACG AGAATTTTCC CGTGGGCTCG
CTGCTGATCA GCCGCCGGCT GCGTCCGCAT GTCCATGCCT ATTACGATTT CGCCCGGGTG
ATCGACGATA TCGTCGATAC CGACCGGCTG GCGCCCGACG CCAAGATCGC ACGGCTGAAT
GCGATGGAGG ACGTGGTGCT GGGCCGCCGG GCCGCGCCCC CGCGCCGCGA CGCGCAGACG
GCGGCGCGCG TGGCCCACGC GCTGGCCGTG ACCGGCGTGC CGGTGACGAC GGCGACCGAC
CTGATCGTGG CCTTTCGCCA GGACGCCGTG AAGAACCGGT ACGAATCGTG GGACGAACTG
GTCGAATATT GCCGCTATTC CGCCAATCCG GTCGGCCGCT TCCTGCTGTG CCTGCATGGC
GAGGACCCGG CCACCTTCGC GCCTTCGGAC GCGCTGTGCA CGTCGTTGCA GGTGCTGAAC
CATCTGCAGG ACTGTGCTGC CGACCTGCGG GCGCTGGACC GGTGCTACCT GCCCCTGCCG
TGGCTGGCGC GCGAGGGCGC GTCGCTGGAC GATCTGGGGG CCTGCCGGGC GTCGCCGGGG
CTGCGCCGGG TGATCGACGC CCTGCTGGAC CGGGTGGACG ACCTGAACGA CGAAGCCGCC
CGCCTGCCGG GCCTGGTCCG CGACCGGCGC ATGCGGCTGG AGGCGGCGGT GATCGTGGGG
CTGGCCCGGC GCCTGACCGC GCGCCTGCGG CGCGAGGACC CGCTGGCCGG GCGCGTGAAA
CTGTCGCGCG GCGACGTGCT GCGGGCGGGG CTGGGGGCGC TGCGCGTACT GCCATGA
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| Protein sequence | MNAIQGQKEA SSPSTDGGVW GTEDVSSGKG AEDENFPVGS LLISRRLRPH VHAYYDFARV
IDDIVDTDRL APDAKIARLN AMEDVVLGRR AAPPRRDAQT AARVAHALAV TGVPVTTATD
LIVAFRQDAV KNRYESWDEL VEYCRYSANP VGRFLLCLHG EDPATFAPSD ALCTSLQVLN
HLQDCAADLR ALDRCYLPLP WLAREGASLD DLGACRASPG LRRVIDALLD RVDDLNDEAA
RLPGLVRDRR MRLEAAVIVG LARRLTARLR REDPLAGRVK LSRGDVLRAG LGALRVLP
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