| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1799 |
|---|
| Symbol | |
|---|
| ID | 6975220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 1993000 |
|---|
| End bp | 1994595 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643391323 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002276174 |
|---|
| Protein GI | 209543945 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0370566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.65053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGCG CCATCCCGTC CCGACGCACA GGACAGCCCC GTTATCACTT CCGCCGTATC
GTCCCGGCAA TGCTCCGCCC CCTGCTGGGC AAGACCGAGA TTTCCCTCGT CCTCCATACC
TCTGATAAAC TGGTCGCCCG TGAACGTGCA GCCGCCCTGT ATGCCAGGAC GGGACAGCTT
TTCAGAGCAG GCAAGATGCA AAACCCCTCC AGAGAGGACC TTCTGGTCCT CTACAGCGAA
TTGATTGAAA ACTACGAAAT CGCTCTGAAG GCTCAGGAGG AGAGTGCCAG AAAAGTGCTG
GAAGCCGAAC GGGCCCAGCA TCTCATTGAA AAAGCCGATC TGGTCTCACG ACAGTCGACC
TTCCTCAACA AGGTCCAGCC CCACATGGAC AGCCTTCTTC AGGCACTGGG GCAACTGAAG
CACACGCTCG ACAGACGGGA TGTCTGGAAC GTCGCTGAAA AACAGGGACT GCAGAACCAG
ATCACCACCC TCAGCACCCT GATCCAGACC AGCCTGCATA GAGGTTCAGA GAACCCGGAA
GAACAAACAC CTTCCCCCAA ACAGCCACGC AGCATGAAAC TGTCGGCGGC GGCTGAGAAA
TTTGTCTTCT CGGTTTCCTC CAAAAGTGCC GGGACCATCA AGGGAACGGG CAAGACCGTA
GCCCTCTTCA CCGAAGCCTT CGGCGATATG CCAGTTCATC AGGTAACCGG GGAAGTCGTG
GGAGAATTTT ACGACCTACT GTCAGGCCTC CCGGCAACAC ATGGCAAAGG CAAGACCACT
CTTCCCCTTC GGGACGCGGT CCGAGAGGCC CAAAAAAGCG AGGGAGAAAC CGTATCGGGC
AAAACCGTCA AAAACCATTT CTCGCGCATG TCCGCGATCT GGAGTGAACT GGTCCGGCGT
GACCACGCCC CCAAAAATCC ATGGGCCAAC TGGTCTTTCG ATCTGACGCA GAAAACCAAC
CGCCGGGCCT GGTTGGAAGA GGAACTGAGA ACACTCCTGA ACTCGAAATG GCTGGGCCGG
GTTTTCCCCG AACGCACCTA TCGGGGCATT GTGCGCATAG CCCTCTATAC CGGCATGCGT
CTGGGTGAGA TCTGCAATCT GAGAAATCAG GATATCGAAA CCCTGAACGG CATTCCCTGT
TTCCATATCC GGCCCCATAC AGTCGAGATC GACGGCAAAA CCCGGGAATG GTCTCCCAAG
ACATCAGCCG GCACCCGTAT CATTCCCATC CACAGCAAAC TGCTGGAAAA AGGGATCATT
GAGGAATTCA GAAATTCCGG CCCCTATCTC TTCAGCGAAC TGCCCATCTC CGCTTCCGGG
GTCCGAGGCG CAAACTTCGA AATGGTCTTT TCCAAACATA AACGGCGTCT GAACCTGCCA
GCGGACGTCA CCTTTCACTC CTTCCGCCAT CTGGTTTCGA CAGTGCTCAG AAACCAGGAC
AGTCACATCC GGGAACTCTG GATTGATGAT CTGCTGGGTC ATGAAGCCAC CCACAAAAGT
CAGGGCACAA CCCAATACAC GTCAGCTATT GATCTGCAGA ACCTCCAGCG GGTTGTGGAG
GCCATTACCT ATCCCGACGA CATCGCAAAC TGGTGA
|
|---|
| Protein sequence | MLRAIPSRRT GQPRYHFRRI VPAMLRPLLG KTEISLVLHT SDKLVARERA AALYARTGQL
FRAGKMQNPS REDLLVLYSE LIENYEIALK AQEESARKVL EAERAQHLIE KADLVSRQST
FLNKVQPHMD SLLQALGQLK HTLDRRDVWN VAEKQGLQNQ ITTLSTLIQT SLHRGSENPE
EQTPSPKQPR SMKLSAAAEK FVFSVSSKSA GTIKGTGKTV ALFTEAFGDM PVHQVTGEVV
GEFYDLLSGL PATHGKGKTT LPLRDAVREA QKSEGETVSG KTVKNHFSRM SAIWSELVRR
DHAPKNPWAN WSFDLTQKTN RRAWLEEELR TLLNSKWLGR VFPERTYRGI VRIALYTGMR
LGEICNLRNQ DIETLNGIPC FHIRPHTVEI DGKTREWSPK TSAGTRIIPI HSKLLEKGII
EEFRNSGPYL FSELPISASG VRGANFEMVF SKHKRRLNLP ADVTFHSFRH LVSTVLRNQD
SHIRELWIDD LLGHEATHKS QGTTQYTSAI DLQNLQRVVE AITYPDDIAN W
|
|---|
| |