Gene Gdia_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1717 
Symbol 
ID6975132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1898351 
End bp1899322 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content57% 
IMG OID643391244 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002276101 
Protein GI209543872 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAC TCTCCATGAG ATCGTTGCAC GCCATGCATC CCAAAGACCT CTCCCTTCTT 
GCCGCACTCG ATCTCCTGCT GACCGAAGGC AGTGTCGCGC GTGCCGCCGC ACGCATGAAT
CTCAGCACAC CCGCGATGAG CCGTATCCTC GGCCATATCC GCGATCTGAC TGGCGATCCA
ATTTTCGTGC GCGCTGGCCG GAGCCTCGTC CCCACGCCGA GAGCCGAAGC CATGCGTCTG
CCGGTACGGG AATTGGTCGC CCGCGCGCGG AGCATTCTGG GTAATGCCGG GGATCTGGAT
CTCGATCGTC TCGATCGAAC CTTTACCCTA CGTGCAACGG ATAGTTTTAT CGGCTCCTTC
GGGCCGCGTC TCGCCGGCCA TCTCACAACT CTTGCGCCAA AAGTCCGACT TCGTTTCGTA
CCGCAAAGGG ACGAGAGTGT CGACGATCTG CGGGAAGGGC AAGTTGACTT GGATATTGGA
GCAATTAGCC ATACCGGCCC GGAAATCATG ACGCAAACTA TTCTGTCAGA CCGATTTGTC
GGCGTCGTGC GGCCTGGGCA TCCGCTTTCA AGTGGTCGTA TTACGTCTGC CCGTTTCTCT
CGTCAGCGGC ATATTTCTGC GTCCCGCCGC GGTCGAATGC ATGGTCCGGT AGATCAGGCG
CTGGGTAGCC TCAATCTATC ACGAAATGTC GTAACGATCG TGCCCACTTT TTCGGATGCC
TTATTATTCG CACGCCAATC TGAACTTGTG GCAGTCGTTC CTGATCGACT GACGGAAGTA
GCGCGACAGG ACATGGTCTC CTTCCCGCTC CCGGTCGAAA CCGGATTGCT CATCATCTCG
CAAGCCTGGC ACCCAAGGTT CCAAGCCGAT GCAACACATC AATGGCTGCG CGCCTGTGTT
CGAGAGATCT GCGCCGAAGA CACCAGCAGC AAGCAGGCGT ATTGCAAAAT ACAAAACAAT
AAAATCAGAT AA
 
Protein sequence
MMQLSMRSLH AMHPKDLSLL AALDLLLTEG SVARAAARMN LSTPAMSRIL GHIRDLTGDP 
IFVRAGRSLV PTPRAEAMRL PVRELVARAR SILGNAGDLD LDRLDRTFTL RATDSFIGSF
GPRLAGHLTT LAPKVRLRFV PQRDESVDDL REGQVDLDIG AISHTGPEIM TQTILSDRFV
GVVRPGHPLS SGRITSARFS RQRHISASRR GRMHGPVDQA LGSLNLSRNV VTIVPTFSDA
LLFARQSELV AVVPDRLTEV ARQDMVSFPL PVETGLLIIS QAWHPRFQAD ATHQWLRACV
REICAEDTSS KQAYCKIQNN KIR