| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1557 |
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| Symbol | |
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| ID | 6974967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1735722 |
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| End bp | 1736861 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643391088 |
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| Product | homocitrate synthase |
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| Protein accession | YP_002275951 |
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| Protein GI | 209543722 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.319892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAA ACGCGCGTCT GCTGATCAGC GACACCACCC TGCGCGATGG AGAGCAGGCG
CCGGGGGTGG CCTTTACCGC GTGGGAAAAG CTGGCCATCG CCGGCGCCCT CGACGCGGCC
GGCGTGGATG AGATCGAGGC CGGCGTTCCG GCCATGGGGG ATGCCGAGAT CGCCATGATC
GCGGCGATCG GCGACGAGGT GGAACGCGCC CGCGTCATCC CCTGGTGTCG CATGCGCGAC
GAAGACGTGC ACGCGGCGCG GCGGACGGGG CTGGGCAGCG TGCACCTGTC CGTTTCGACC
TCGGTCCGGC AGATCCAGGC GAAATACCGC ATGTCGCCGC GTCGCACGCT GGACATGGCG
CGCGACGTCG TCTCCCGCGC CAGGGATTAC GGCCTGGCGG TGTCGGTGGG GGGCGAGGAC
GCCAGCCGGG CCGATCCGGC CTATCTGGTC GATCTGCTGG GCGTGATCGC CGAGGCAGGG
GCGTTCCGCT TCCGCTTCGC CGATACGCTG GGCGTGATGG ACCCGTTCGG CGTGCACGAG
GTCATGCGGT ATCTCTGCCA GTCCAGCCCG CTTCAGCTTG AATTTCACGG CCATGACGAT
CTGGGCCTGG CAACGGCCAA TACGCTGGCC GCCGTGCGGG CCGGCGCGGC GTGCGCCAGT
GTCACCGTCC TGGGACTGGG CGAACGCGCG GGCAACGCCC CGCTGGAGGA AGTGGTGGCG
GGGGTATATC GCCTGCTGGG CCGTCCGGCG GGCGTGAAGC TGGACAGCCT GCCCGGGCTT
GCCACCCTGG TCTCGCGCGC CGCCGTGCGT GATATCCCGC CCGACAAGGC GATCGTCGGC
GACGCGGTCT TTCGTCATGA ATCGGGCATC CATGTCTCGG GCCTGCTGCG TGACGCCGCG
ACGTATGAGG CACTGGACCC CGTGCAGTTC GGCCGCCAGC GCGAAATCGT GCTGGGCAAG
CATTCCGGCC GGGCCGCGGT ACGGCACGCG CTGGCGGCGC TGGGCCTGGA TGCCGACGAA
ACCGTCATCG CGGCCACGCT TGCCGCCGTG CGCGCGCGTG CCTCCGCCGC CAAGCGCACG
GTGGCGCTGG CCGAACTGGC CGAAATGCAT GCGGGCCTGA TGGCAGGCGT GTCGAAATAA
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| Protein sequence | MSENARLLIS DTTLRDGEQA PGVAFTAWEK LAIAGALDAA GVDEIEAGVP AMGDAEIAMI
AAIGDEVERA RVIPWCRMRD EDVHAARRTG LGSVHLSVST SVRQIQAKYR MSPRRTLDMA
RDVVSRARDY GLAVSVGGED ASRADPAYLV DLLGVIAEAG AFRFRFADTL GVMDPFGVHE
VMRYLCQSSP LQLEFHGHDD LGLATANTLA AVRAGAACAS VTVLGLGERA GNAPLEEVVA
GVYRLLGRPA GVKLDSLPGL ATLVSRAAVR DIPPDKAIVG DAVFRHESGI HVSGLLRDAA
TYEALDPVQF GRQREIVLGK HSGRAAVRHA LAALGLDADE TVIAATLAAV RARASAAKRT
VALAELAEMH AGLMAGVSK
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