| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1445 |
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| Symbol | |
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| ID | 6974853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1612029 |
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| End bp | 1613411 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643390975 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_002275839 |
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| Protein GI | 209543610 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.40462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATG CGCGCACTCG GGACGATCAG AGTCGTCTGA CCAGCTTTGT CCCGCACTCC
CTGTTCGATT CTCTGGCCAT CGCCTACTTG ACGAATCCCA CCCTGCGGCA GGAGCGTGCG
ATGCTCCGCG CGCAGGACGA GGGTGTGCCT ACGGCCCTGG CGGGCTGGCG GCCCCAGATT
TCAGGACAGG CCGGCGTGAC CTATTACGAC GGGCGAAGCA ACTATCGCGG CACAGGCGAT
TATCTCGGAT ATTCCCGGAT CTATTCGACT CCAGGTTATA GGGCTGGTGT CGATATTCAA
CAGCCGGTCT ATTCCGGCGG AAAGACTACC GCCTCCACCC ATCAAGCCGT CAACAAGGTG
ATGGCGGAAC GAGCCAACCT GATCTCGGTC GAGCAGAAAG TCTTCCAGGC GGTCGTCAAA
GCCTATATCG GCGTTGTCGA TGACACGCAA TTGCTCAGGA TCAATCAAGG CAATGAGCGC
GTGCTGGCCG ATCAGCTTCG GGCGACGAAA ACGCGCTTTC GCGATGGCGA GATCACCCGC
ACCGACGTAG ACCAGGCCCA GGCGGCGCTG GCTGCCGCTA CGTCACAGCG CGAGCGGGCC
GAGGGAACAC TGGATGCGGC CCGCGCAGCC TATCTTCAGG TCGTAGGCGT AACCGCGCCC
GCTGATCTGC TGCCGCCACA GCCGCTGGCC CTCCCGACGA TGTCGGACGA GGAGGCGGGG
GCATTGGCCG CGCAGAACCA TCCGGACGTC ATCAATGCGC TATTCACCCA GTCGGCGCAG
AAGGACGCCG TTGATGTCGC GATTTCGGCT CTTATGCCCA CATTGACGGC GGAGGTGGCC
TATCAACGTG GAGTCAATCA GGGCCTCGGC GGCCAGTTTA CTGAAAACAA ATATGCCGCA
TTGACGATGC AGGTTCCTCT CTATCAAGGC GGATCGGAAT ACGCCGCGAT CCGTCAGGCC
CGGCAGCAGG CGCAGGCTGG ACAGCAAGCC GTCGATGCCC AACGCCGAGA AGCGACTCAG
TTGGCGTCCA CGGCGTGGCA CCAGCTCCTG TCCGCACGAG CCTCCGTTGT CAGTGATCGC
TTGGCCATCA CAGCCAGTAC GGCCGCACGT GATGGGGTCC GGCGTCAGGC GTTGGAAGGC
GTGAGTACAA CGCTGGAGGT TTTGCAACAG CAAGAGGCCC TGCTGCAATC TGAAGTGACG
CTGATTCAGG ATTTAGGCGC CCTGGTCACT GCATCCTACG ACGTGGCGGC GGCCATCGGG
CGATTGACCG CGGTGGATCT GAACCTGAGC GTCCCACTCT ACGATGAGAA AGCTTATTAC
CGGGCGGTCA AGGACCGTCT GTGGAGCATG AATGATTTCG CGCGTAGCCA ACCCGGACGC
TGA
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| Protein sequence | MGDARTRDDQ SRLTSFVPHS LFDSLAIAYL TNPTLRQERA MLRAQDEGVP TALAGWRPQI
SGQAGVTYYD GRSNYRGTGD YLGYSRIYST PGYRAGVDIQ QPVYSGGKTT ASTHQAVNKV
MAERANLISV EQKVFQAVVK AYIGVVDDTQ LLRINQGNER VLADQLRATK TRFRDGEITR
TDVDQAQAAL AAATSQRERA EGTLDAARAA YLQVVGVTAP ADLLPPQPLA LPTMSDEEAG
ALAAQNHPDV INALFTQSAQ KDAVDVAISA LMPTLTAEVA YQRGVNQGLG GQFTENKYAA
LTMQVPLYQG GSEYAAIRQA RQQAQAGQQA VDAQRREATQ LASTAWHQLL SARASVVSDR
LAITASTAAR DGVRRQALEG VSTTLEVLQQ QEALLQSEVT LIQDLGALVT ASYDVAAAIG
RLTAVDLNLS VPLYDEKAYY RAVKDRLWSM NDFARSQPGR
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