| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1306 |
|---|
| Symbol | |
|---|
| ID | 6974711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 1458011 |
|---|
| End bp | 1459834 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643390835 |
|---|
| Product | GTP-binding protein TypA |
|---|
| Protein accession | YP_002275703 |
|---|
| Protein GI | 209543474 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTC GCAATATCGC CATCATCGCC CACGTCGACC ATGGCAAGAC CACGCTGGTT
GACCAGTTGC TGAAGCAGTC GGGCTCGTTC CGCGAAAACC AGCACGTCGC CGAGCGTGCG
ATGGACAGCA ACGACCTGGA ACGCGAACGC GGCATCACGA TCCTGGCCAA GTGCACGTCG
GTGGTGTGGA AGGACACCCG CATCAACATC ATCGATACGC CGGGCCACGC CGATTTCGGC
GGCGAGGTCG AGCGGATCCT CAGCATGGTG GACGGCGCCG TGGTGCTGGT GGACGCGGCC
GAGGGCGCGC TGCCGCAGAC CAAGTTCGTG GTCGGCAAGG CGCTGGCCCG CGGCCTGAAG
CCGATCGTGG TGGTGAACAA GATCGATCGC GGCGACGCCC GCCCCGACGA AGTGCACAAC
GAGATCTTCG ACCTGTTCGC CGCCCTGGGC GCGAACGACG AGCAGCTCGA TTTCCCGATG
CTCTTCGCCT CGGGCCGCCA GGGCTGGGCG GATGAGGAAC TGGAGGGCGC GCGCAAGGAC
CTGGCCCCGA TGTTCGACCT GATCGTGCGG CACGTTCCGC CGCCGCAGGT GGATAAGGAC
GCGCCCTTCG CCATGGTCGC CACCATCCTG GAAAACGACA ACTTCCTTGG CCGCGTGCTG
ACCGGCCGCG TCGAGCAGGG ACGCGCCAAG GTCAACATGC CGGTGCGCGT GCTGCGTCCC
GACGGCTCGG TGGTCGAAAC CGGACGCCTG ACCAAGCTGC TGTCCTTCCG CGGACTGGAG
CGCGTGCCGG TGGAGGAAGC CGAGGCCGGT GACATCGTCG CGGTCGCGGG CCTGTCCGAG
GCGACCATTC CCGAAACCAT CGCCTCGCCC GAAATCACCG AGCCGCTGGC CTCGACCCCC
GTCGATCCGC CGACCCTGTC GATGACCTTC CGCCTGAATG ACGGCCCGCT GGGCGGCCGC
GAGGGCAAGA AGGTGACGTC GCGCCAGATC CGCGACCGCC TGTTCAAGGA AACCGAGGGC
AACATCGCCA TCCGCGTGAC CGACAGCCCC GAAAGCGAGG CGTTCGAGGT CGCGGGCCGT
GGCGAACTGC AGCTTGGCGT GCTGATCGAG CAGATGCGCC GCGAGGGTTT CGAACTGACC
ATCGGCCGCC CCCGGGTGCT GTTTCGCACC AACGAGGAGA CCGGCGAGCG CGAAGAGCCG
TTCGAAGAGG TCCTGATCGA CGTCGACGAG CCCTATTCGG GCGTGGTGGT CGAGAAGATG
GCGCAGCGCA AGGGCCTGAT GCAGGACATG CAGCCGTCGG GCGGCGGCAA GGTGCGCCTG
ACCTTCCTGA TCCCGTCGCG CGGCCTGATC GGCTATCACG GCGAATTCCT GACCGACACG
CGCGGCACGG GCATCATGAA CCGGCTGTTC GCCGGCTACC AGCCCTGGGC CGGCGCGATC
GAGGGGCGTC GCAACGGGTC TCTGATCTCG TCGGAAGACG GGGCGACGAC GCAGTACTCG
CTGTTCTCGT TGCAGGAGCG CGGGACCCTG TTCGTCGATG CGGGCGAAAA GGTCTATGTC
GGCATGATCA TCGGCGAGCA TTCGCGTGAG AACGACCTGG AAGTGAATCC GGTCCGCGAA
AAGAAGCTGA CGAACATCCG CGCCGCCGGC AAGGACGACG CGCTGCTGCT GACCCCGCCC
CGGAAGATGA GCCTGGAACA GGCGATCGCC TATATCGAGG ACGACGAACT GGTCGAGGTC
ACGCCCAGCG CGGTGCGAAT CCGCAAGCGC TACCTGGACC CGCATGAGCG CAAGAAGCGC
GACCGCCAGG GCGCCTCGGC CTGA
|
|---|
| Protein sequence | MDIRNIAIIA HVDHGKTTLV DQLLKQSGSF RENQHVAERA MDSNDLERER GITILAKCTS
VVWKDTRINI IDTPGHADFG GEVERILSMV DGAVVLVDAA EGALPQTKFV VGKALARGLK
PIVVVNKIDR GDARPDEVHN EIFDLFAALG ANDEQLDFPM LFASGRQGWA DEELEGARKD
LAPMFDLIVR HVPPPQVDKD APFAMVATIL ENDNFLGRVL TGRVEQGRAK VNMPVRVLRP
DGSVVETGRL TKLLSFRGLE RVPVEEAEAG DIVAVAGLSE ATIPETIASP EITEPLASTP
VDPPTLSMTF RLNDGPLGGR EGKKVTSRQI RDRLFKETEG NIAIRVTDSP ESEAFEVAGR
GELQLGVLIE QMRREGFELT IGRPRVLFRT NEETGEREEP FEEVLIDVDE PYSGVVVEKM
AQRKGLMQDM QPSGGGKVRL TFLIPSRGLI GYHGEFLTDT RGTGIMNRLF AGYQPWAGAI
EGRRNGSLIS SEDGATTQYS LFSLQERGTL FVDAGEKVYV GMIIGEHSRE NDLEVNPVRE
KKLTNIRAAG KDDALLLTPP RKMSLEQAIA YIEDDELVEV TPSAVRIRKR YLDPHERKKR
DRQGASA
|
|---|
| |