| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1286 |
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| Symbol | |
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| ID | 6974691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1430186 |
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| End bp | 1432192 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643390815 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002275683 |
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| Protein GI | 209543454 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGGGA CAACACACAC ACCCCCACAG ATCGCGGTCC GGGCCTTTCT GGCCGGTGCC
GCCCTTCTGG CAGGAGCGAC GTTCACGCCG CTGCGTGTCC AGACCGCGAA CGCCCGGAAC
ACGGACGGAC ATCCGTCCGG CCCGGGCGAG CGGAACGAGG AAACGGCCCT GGCCATGCCG
CGGATCGCGC CGCCTGGTGG CGGAGCGGTC GGACTGGCCC AGCCGCTGAG CCCGGACGTC
GTCGCCCAGG TACGCCGGAT CTTCAGCCTG CAGCGCGCGG GGGCGTTCGA CGACGCCATC
CGGGAGACCG CGCAATTGCG CGACGACACT CTGCTGGGCG ACATCCTGGC CGACCGCTAC
CTGAATCCCG CCTATCATCC CGCGCCGGGG CAGTTGCGGC TGTGGCTGCG CACCTTTTCC
ACCCTGGCCG ACGCCCCCGC CATCCACACG CTGCTGGCCG GCCTGTCGCC GCGCGGCGCC
AGCCTGCCGC CGCTGCCCGC GCAGATGGCG CTGGCGGCCG GCACCGGAGC GGCGGCCATG
CGCCCGCCGG AAGAGGACGA TCCCGCCGGC CGGGCCTTCG CCCGCAACCC GCTGCTGGAC
CGGACGGTGC GCGACCGGGC CGAGCAGGGG GTGAAGGGCG CGCGCAGCGC GCTGCACCTG
ATCAAGATCA CGCCGGGCAT CGGCGACCTG TATGCCGCGC AGTTGCGCGC CGAGGTCGCG
ATGACGCTGT TCAGCGCGGG CGAAACCGCC CTGGCGCTGC GGACGGGGCA GGATGCCTTC
ATCCAGTCCG GCGGCCGGAT CGGCCTGGCC GGCTATGTCG CCGGCCTGGC GGCCTGGCGC
CGGGGACGGC CCGACATTGC CGAACCGCTG TTCGAAGGCG CGTCGCGCGC CGAGCTGACG
GCGGCCGGCA TCCGGGCCGG CGCCGCCTTC TGGGCGGCCC GGGCGCACCG CAATACCGGC
GACCTGGCGG CCTATCATCC CTGGCTGCAT CGCGCCGCCG CCGCCCCGCA CACGTTCTAC
GGCCTGCTGG CGGCCCAGTT GCTGGGCCTG CGCCCGGCGA AGGGCCAGCA CGCCGCGGAC
ACGTCCCTTC CCGGTGAGCC CCTTTCCGGC GAACCCGCCG CGCCGTCCGC CATGCCGGCG
GAAGACCGGA CGATGCTGCA TGCCGGCGCG CCGGTCATGG GCGAAATCGA CGTGGACGCC
GTGGCCGCGA AACCGGCCGG GCGGCGGGCC TTCGCCCTGT TGCAGGTCGG CGAGACGGCC
CGGGCGGAAG CCGCCCTGCG CCGCCTGTGG CCCGAGGTGC AGGGCGATGC CGCCCTGTGC
CGCTCGATCC AGCTTGTGGC CGATGCCGCC GGGCTGACGG GCCTGTCGGC GCAATTGTCG
TCGCTGCTGG CATCACAGGG CGCGCCCCAG CCGGCCGTGC CCTCCCGCTT TCCGACGCCG
CGCCTGGCGC CCAGCCATGG GTTCAGGGTC GATCCGGCGC TGGTCTATGC CCTGACGCGC
CTGGAATCGA ATTTCGACAG CGGGGCGATT TCCGGGTCCG GCGCGCATGG GCTGATGCAG
ATCATGCCGA CGACCGCCAG CTTCGTGACC GGCAGGACCC GGCGTTTCGA AGCGGCCCCG
GCGCTGCTGC ACAATGCGGC GACGAACCTG GATATCGGGC AGCTCTACGT CCTTTACCTG
GCGCACCTGA GCGAACAGCA TGCCGGCGGC CGTCACCCGT CCGGCGGCGA CCTGGTGCGG
CTGCTGGCCA GCTACAATGC CGGGCCGGGG GCGATTTCCC GACAGGAAGC CCTGAACGAT
TGCGGTGACG ACCCGCTGCT GTTCATCGAA AGCCTGCCCA GCGCCGAGAC GCGGGATTAC
GTCCATCGCG CCCTGACCTA TCTGTGGATC TATGCCGACC AGATGGGCCT GCCCACGCCG
TCGCTGGAAA CCCTGGCGCG CAACGAATGG CCCGCCTTCG CCGCCGAGCA GGACCTGGCC
GGCCGCCACT TCCACACCAT ACACTGA
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| Protein sequence | MRGTTHTPPQ IAVRAFLAGA ALLAGATFTP LRVQTANARN TDGHPSGPGE RNEETALAMP
RIAPPGGGAV GLAQPLSPDV VAQVRRIFSL QRAGAFDDAI RETAQLRDDT LLGDILADRY
LNPAYHPAPG QLRLWLRTFS TLADAPAIHT LLAGLSPRGA SLPPLPAQMA LAAGTGAAAM
RPPEEDDPAG RAFARNPLLD RTVRDRAEQG VKGARSALHL IKITPGIGDL YAAQLRAEVA
MTLFSAGETA LALRTGQDAF IQSGGRIGLA GYVAGLAAWR RGRPDIAEPL FEGASRAELT
AAGIRAGAAF WAARAHRNTG DLAAYHPWLH RAAAAPHTFY GLLAAQLLGL RPAKGQHAAD
TSLPGEPLSG EPAAPSAMPA EDRTMLHAGA PVMGEIDVDA VAAKPAGRRA FALLQVGETA
RAEAALRRLW PEVQGDAALC RSIQLVADAA GLTGLSAQLS SLLASQGAPQ PAVPSRFPTP
RLAPSHGFRV DPALVYALTR LESNFDSGAI SGSGAHGLMQ IMPTTASFVT GRTRRFEAAP
ALLHNAATNL DIGQLYVLYL AHLSEQHAGG RHPSGGDLVR LLASYNAGPG AISRQEALND
CGDDPLLFIE SLPSAETRDY VHRALTYLWI YADQMGLPTP SLETLARNEW PAFAAEQDLA
GRHFHTIH
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